RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Dusp10Q9ESS0 483 aa14.19□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Fam50bQ9WTJ8 334 aa14.19□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ints4Q8CIM8 964 aa14.19□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ssr1Q9CY50 286 aaKnown RBP14.19□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Hip1rQ9JKY5 1068 aa14.19□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ppp1r15aP17564 657 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Fhod1Q6P9Q4 1197 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 TxlnaQ6PAM1 554 aaKnown RBP14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Sgsm2Q80U12 1005 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ppp2r2cQ8BG02 447 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Rsph6aQ8CDR2 708 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Gcom1E9PZ54 550 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 MyzapQ3UIJ9 466 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cdca8Q8BHX3 289 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Atf7Q8R0S1 413 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Aox1O54754 1333 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Gm10563F6WIE4 79 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cep112Q5PR68 954 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Klra4Q60651 263 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Dennd6aQ8BH65 605 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 SarnpQ9D1J3 210 aaKnown RBP14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ptch1Q61115 1434 aa14.18□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 MmeQ61391 750 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Zfp317Q8C0Q5 607 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Brd3Q8K2F0 726 aaKnown RBP14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cdc42bpaQ3UU96 1719 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Rnf123Q5XPI3 1314 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Psen1P49769 467 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ddx58Q6Q899 926 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Atg3Q9CPX6 314 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 TmpoQ61033 693 aaKnown RBP14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Tmem132eQ6IEE6 982 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Nek9Q8K1R7 984 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Coro7Q9D2V7 922 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 AvenQ9D9K3 342 aa14.17□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Irgm2A0A140LIF8 407 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Mdh1P14152 334 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Specc1lQ2KN98 1118 aaKnown RBP14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Q3UJC8 639 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cdc37Q61081 379 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Kiaa1524Q8BWY9 907 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Vps37cQ8R105 352 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Tut1Q8R3F9 869 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Kri1Q8VDQ9 704 aaKnown RBP14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Rab3il1Q8VDV3 383 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Mybbp1aQ7TPV4 1344 aaKnown RBP14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ap1g2O88512 791 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ppfibp1Q8C8U0 969 aaKnown RBP14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Mkrn1Q9QXP6 481 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Hfm1D3Z4R1 1434 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Slc1a4O35874 532 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Limch1Q3UH68 1057 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Usp27Q8CEG8 438 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 KynuQ9CXF0 464 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cfap99A0A140LIX9 648 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Secisbp2lQ6A098 1086 aaKnown RBP14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Nek5Q7TSC3 627 aa14.16□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Tpm3-rs7D3Z2H9 248 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Cct4P80315 539 aaKnown RBP14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ankrd40Q5SUE8 363 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Npdc1Q64322 332 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Bbof1Q3V079 533 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Sycp1Q62209 993 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Fsd1Q7TPM6 496 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Mphosph10Q810V0 681 aaKnown RBP14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Gpt2Q8BGT5 522 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Rassf10Q8BL43 508 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Klhl30Q8C3F7 581 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ppp4r3bQ922R5 820 aa14.15□□□□□ -0.14
Pcdh1-202ENSMUST00000159405 Ccdc191J3QQ27 883 aa14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ccdc40Q8BI79 1192 aa14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Fam193aQ8CGI1 1231 aaKnown RBP14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Eif3cQ8R1B4 911 aaKnown RBP14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Lztfl1Q9JHQ5 299 aa14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Add2Q9QYB8 725 aa14.15□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Adamts12Q811B3 1600 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Proca1B0QZF7 307 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Dusp9Q7TNL7 452 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ccdc181Q80ZU5 509 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 TxlnbQ8VBT1 685 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Sirt1Q923E4 737 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ccdc39Q9D5Y1 937 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Letm1Q9Z2I0 738 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ppfia4B8QI36 1187 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Cd209bQ8CJ91 325 aa14.14□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Gm21698A0A087WQP8 267 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ugt1a5B2RT14 529 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Gm21671G3UY31 267 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Chpf2Q3UU43 768 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Snd1Q78PY7 910 aaKnown RBP14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Necab1Q8BG18 352 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Hpcal4Q8BGZ1 191 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Uhrf1bp1B2KF50 1429 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Fancd2Q80V62 1450 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Snap23O09044 210 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Mdm2P23804 489 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Fam107bQ3TGF2 131 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Ccdc33Q3ULW6 985 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Calcoco1Q8CGU1 691 aa14.13□□□□□ -0.15
Pcdh1-202ENSMUST00000159405 Osbpl1aQ91XL9 950 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms