RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 TrdnE9Q9K5 693 aa28.44■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Gm21985Q6P6P5 1106 aa28.44■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Plcd1Q8R3B1 756 aa28.44■■■□□ 2.14
Ubp1-203ENSMUST00000116492 R3hcc1Q8BSI6 488 aa28.43■■■□□ 2.14
Ubp1-203ENSMUST00000116492 TnksQ6PFX9 1320 aa28.43■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Ncoa5Q91W39 579 aaKnown RBP28.43■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Srgap1Q91Z69 1062 aa28.43■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Akap11E9Q777 1895 aa28.43■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Spata31d1bE9QA57 1361 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Atp8a2P98200 1148 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Limch1Q3UH68 1057 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 AidaQ8C4Q6 305 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Lmbrd2Q8C561 694 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Rbm17Q8JZX4 405 aaKnown RBP28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 BrapQ99MP8 591 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Krt85Q9Z2T6 507 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Hdac6Q9Z2V5 1149 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Marf1Q8BJ34 1730 aaKnown RBP28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Wdr33Q8K4P0 1330 aaKnown RBP28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Klhl34A2AI76 644 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 TsksO54887 585 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Cyp19a1P28649 503 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Exosc10P56960 887 aaKnown RBP28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Smarcc2Q6PDG5 1213 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Ano1Q8BHY3 960 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Zbtb22Q9Z0G7 638 aa28.42■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Cyp3a57D3YYZ0 503 aa28.41■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Becn1O88597 448 aa28.41■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Smim5Q8BT42 78 aa28.41■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Ftl2P49945 183 aa28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 CgnP59242 1191 aa28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Ltv1Q6NSQ7 470 aaKnown RBP28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Atad2Q8CDM1 1040 aa28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Mcm3P25206 812 aaKnown RBP28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Ndufa8Q9DCJ5 172 aa28.4■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Usp42B2RQC2 1324 aaKnown RBP28.39■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Anp32cQ64G17 123 aa28.39■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Nip7Q9CXK8 180 aaKnown RBP28.39■■■□□ 2.14
Ubp1-203ENSMUST00000116492 Cfap73J3QPZ5 306 aa28.39■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Pde4dQ01063 747 aa28.39■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Igflr1Q3U4N7 345 aa28.38■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Ccdc162pQ0VG85 912 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Dcaf5Q80T85 946 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Ncaph2Q8BSP2 607 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 GptQ8QZR5 496 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Hap1O35668 628 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Adam1aQ60813 791 aa28.37■■■□□ 2.13
Ubp1-203ENSMUST00000116492 MetP16056 1379 aa28.36■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Znf692Q3U381 531 aa28.36■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Nlrp3Q8R4B8 1033 aa28.36■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Zkscan8Q8BSL0 588 aa28.36■■■□□ 2.13
Ubp1-203ENSMUST00000116492 BcanQ61361 883 aa28.35■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Mrpl44Q9CY73 333 aaKnown RBP28.35■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Utp3Q9JI13 469 aaKnown RBP28.35■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Add3Q9QYB5 706 aaKnown RBP28.35■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Trim56Q80VI1 734 aaKnown RBP28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Fam160b2Q80YR2 744 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Tmem67Q8BR76 992 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Zfp317Q8C0Q5 607 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Pms1Q8K119 917 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Carmil3Q3UFQ8 1375 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Gpr182P43142 395 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Pank2Q3U4S0 443 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Jmjd4Q8BFT6 427 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Rufy2Q8R4C2 606 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Pes1Q9EQ61 584 aaKnown RBP28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Kcnq5Q9JK45 933 aa28.34■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Ubash3aQ3V3E1 624 aa28.33■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Fkbp1aP26883 108 aaKnown RBP28.33■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Csrnp1P59054 583 aa28.33■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Adcy5P84309 1262 aa28.33■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Ttc27Q8CD92 847 aa28.33■■■□□ 2.13
Ubp1-203ENSMUST00000116492 Greb1lB9EJV3 1913 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Lrp6O88572 1613 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Sik1Q60670 779 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Fam84aQ9D650 292 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Appbp2Q9DAX9 585 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ssc5dQ8BV57 1371 aa28.32■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Cops6O88545 324 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Usp25P57080 1055 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Atp2b3Q0VF55 1220 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Zbtb38Q3LR78 1197 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Trim59Q922Y2 403 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Casz1Q9CWL2 1761 aa28.31■■■□□ 2.12
Ubp1-203ENSMUST00000116492 EzrP26040 586 aaKnown RBP28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Snx13Q6PHS6 957 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ccne2Q9Z238 404 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Bach2P97303 839 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Mindy4Q3UQI9 744 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Spty2d1Q68FG3 682 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Map10Q8BJS7 891 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Mtmr3Q8K296 1196 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Ginm1Q91WR6 327 aa28.3■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Sik3Q6P4S6 1311 aa28.29■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Lins1Q3U1D0 764 aa28.29■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Riok1Q922Q2 567 aa28.29■■■□□ 2.12
Ubp1-203ENSMUST00000116492 TnmdQ9EP64 317 aa28.29■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Cyp2d34L7N463 504 aa28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Cct2P80314 535 aaKnown RBP28.28■■■□□ 2.12
Ubp1-203ENSMUST00000116492 Fsd1Q7TPM6 496 aa28.28■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms