RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Ccdc129Q14B48 1034 aa12.38□□□□□ -0.43
Clip1-204ENSMUST00000111564 Haus2Q9CQS9 234 aa12.38□□□□□ -0.43
Clip1-204ENSMUST00000111564 Tbc1d8bA3KGB4 1114 aa12.38□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ssrp1Q08943 708 aaKnown RBP12.38□□□□□ -0.43
Clip1-204ENSMUST00000111564 Trim25Q61510 634 aaKnown RBP12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 ParnQ8VDG3 624 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Smc1aQ9CU62 1233 aaKnown RBP12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Tmem132eQ6IEE6 982 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Krt7Q9DCV7 457 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Krt15Q61414 452 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Speer4f2E9Q366 295 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Cnnm2Q3TWN3 875 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Frmd3Q8BHD4 595 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Fam13bQ8K2H3 851 aa12.37□□□□□ -0.43
Clip1-204ENSMUST00000111564 Rbm17Q8JZX4 405 aaKnown RBP12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Cabp5Q9JLK3 173 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Taf7Q9R1C0 341 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Arhgef28P97433 1693 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Adamtsl3G3UXC7 1706 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 IghaA0A0A6YXW6 389 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ddx19aQ61655 478 aaKnown RBP12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 RbsnQ80Y56 783 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Slc4a8Q8JZR6 1089 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Klhl10Q9D5V2 608 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Gm4758L7N258 96 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Naa15Q80UM3 865 aaKnown RBP12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ptcd1Q8C2E4 695 aaKnown RBP12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 2310002L09RikQ9D7L5 217 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Kdm5aQ3UXZ9 1690 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Map3k19E9Q3S4 1311 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Dennd3A2RT67 1274 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Tom1l2Q5SRX1 507 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ranbp6Q8BIV3 1105 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ttc12Q8BW49 704 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Tut1Q8R3F9 869 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Pcdhb5Q91XZ5 792 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Sil1Q9EPK6 465 aa12.36□□□□□ -0.43
Clip1-204ENSMUST00000111564 Gm42641I6L9G2 585 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 CalrP14211 416 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Igflr1Q3U4N7 345 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 AtripQ8BMG1 785 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Otud6bQ8K2H2 294 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Pcdhb2Q91Y00 799 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Hmg20bQ9Z104 317 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Usp25P57080 1055 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ssx2ipQ8VC66 615 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ktn1Q61595 1327 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Hoxb7P09024 217 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Abcf1Q6P542 837 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Skida1Q80YR3 822 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Atf7Q8R0S1 413 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Calm1P0DP26 149 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Calm2P0DP27 149 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Calm3P0DP28 149 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Gjc1P28229 396 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 IntuQ059U7 942 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Fam204aQ8C6C7 236 aa12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 Mrpl44Q9CY73 333 aaKnown RBP12.35□□□□□ -0.43
Clip1-204ENSMUST00000111564 GancQ8BVW0 898 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 SltmQ8CH25 1031 aaKnown RBP12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Zbtb3Q91X45 518 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 DnmbpQ6TXD4 1580 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Eif6O55135 245 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Xpo5Q924C1 1204 aaKnown RBP12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Fam213aQ9CYH2 218 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Baiap2l1Q9DBJ3 514 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Bcar3Q9QZK2 820 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Itsn1Q9Z0R4 1714 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ift57Q8BXG3 429 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ano2Q8CFW1 1002 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Prkag2Q91WG5 566 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Dpp7Q9ET22 506 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Dip2aQ8BWT5 1523 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Gm44503E9PYU5 387 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Atp2b1G5E829 1220 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Caprin2Q05A80 1031 aaKnown RBP12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Cadps2Q8BYR5 1297 aa12.34□□□□□ -0.43
Clip1-204ENSMUST00000111564 Ccdc170D3YXL0 722 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Mybl2P48972 704 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Stoml1Q8CI66 399 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Amotl2Q8K371 772 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Arhgef6Q8K4I3 771 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Cnot6lQ8VEG6 555 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Ankrd1Q9CR42 319 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Zap70P43404 618 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Sp4Q62445 782 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Ivns1abpQ920Q8 642 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Zbtb43Q9DAI4 467 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Prdm2A2A7B5 1709 aaKnown RBP12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Spocd1B1ASB6 936 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 E9QMW4 1145 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Kif5bQ61768 963 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Spag5Q7TME2 1165 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 AdpgkQ8VDL4 496 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 SrrtQ99MR6 875 aaKnown RBP12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 AW822073A0A0N4SUK1 652 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Zfp853A0A1D5RM95 733 aa12.33□□□□□ -0.44
Clip1-204ENSMUST00000111564 Mroh7A2AVR2 1279 aa12.32□□□□□ -0.44
Clip1-204ENSMUST00000111564 Tbc1d5Q80XQ2 815 aa12.32□□□□□ -0.44
Clip1-204ENSMUST00000111564 Vps16Q920Q4 839 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms