RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Ccdc129Q14B48 1034 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Mcm7Q61881 719 aaKnown RBP8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Def6Q8C2K1 630 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Afg3l2Q8JZQ2 802 aaKnown RBP8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 CtsqQ91ZF4 343 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Aldh1b1Q9CZS1 519 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Nid2O88322 1403 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Lcmt1A0A0U1RNF2 332 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Rps8P62242 208 aaKnown RBP8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Brinp3Q499E0 766 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Polr3gQ6NXY9 223 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Atf7Q8R0S1 413 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 KarsQ99MN1 595 aaKnown RBP8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Cabp5Q9JLK3 173 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Clip2Q9Z0H8 1047 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Fndc1E9Q043 1732 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Arhgef40Q3UPH7 1517 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Dusp9Q7TNL7 452 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 4933409G03RikQ8C5U0 320 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Sulf1Q8K007 870 aa8.13□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Rims1Q99NE5 1463 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ftl1P29391 183 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Idi1P58044 227 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Kif11Q6P9P6 1052 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Myl6bQ8CI43 207 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Cd248Q91V98 765 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ttc21aQ8C0S4 1314 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Prl3d3A0A0M6L0J6 224 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Tdo2P48776 406 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Lamc2Q61092 1191 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Arid3aQ62431 601 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Fam208aQ69ZR9 1610 aaKnown RBP8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Zmynd15Q8C0R7 736 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Nsrp1Q5NCR9 542 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Drc7Q6V3W6 876 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Larp1Q6ZQ58 1072 aaKnown RBP8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Txndc16Q7TN22 820 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Gle1Q8R322 699 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Haus2Q9CQS9 234 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Trmt44Q9D2Q2 713 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Zbtb43Q9DAI4 467 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 AatkQ80YE4 1365 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Rnaseh1O70338 285 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Zfp444Q3TDV8 331 aaKnown RBP8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Kmt5bQ3U8K7 883 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 PogkQ80TC5 607 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Triml1Q8BVP1 470 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ubac1Q8VDI7 409 aa8.12□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Metap2O08663 478 aaKnown RBP8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Magea6O89010 325 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Magea3Q6T340 320 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Pdzd9Q9D9M4 266 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ankrd44B2RXR6 993 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Mx1P09922 631 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Gnrh1P13562 90 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Atp1b3P97370 278 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Plbd2Q3TCN2 594 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Maco1Q7TQE6 664 aaKnown RBP8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Podxl2Q8CAE9 603 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 PalmdQ9JHU2 551 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 1700029H14RikE9PY36 240 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Eya2O08575 532 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Abcd1P48410 736 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 AcrbpQ3V140 540 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Tekt3Q6X6Z7 490 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Fam114a1Q9D281 569 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Robo2Q7TPD3 1470 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Cfap65Q3V0B4 1847 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Nkx1-1G3UXB3 402 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Dcaf5Q80T85 946 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Slc13a4Q8BZ82 625 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ctage5Q8R311 779 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ncapd2Q8K2Z4 1392 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Rad51bO35719 350 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ccdc189Q6NZQ0 333 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 GopcQ8BH60 463 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Gimap3Q99MI6 301 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 CsadQ9DBE0 493 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Abcc12Q80WJ6 1366 aa8.11□□□□□ -1.11
Scn1a-202ENSMUST00000094951 LyarQ08288 388 aaKnown RBP8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Dpp9Q8BVG4 862 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Aldh1l2Q8K009 923 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Tnfrsf10bQ9QZM4 381 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Uhrf1bp1lA2RSJ4 1457 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Disp3A3KFU9 1347 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 4933406M09RikG3XA12 479 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Mmp14P53690 582 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Smarcad1Q04692 1021 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Cyp2c67Q569X9 491 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ltv1Q6NSQ7 470 aaKnown RBP8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Taok2Q6ZQ29 1240 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 SympkQ80X82 1284 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ccdc113Q8C5T8 377 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Gemin5Q8BX17 1502 aaKnown RBP8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Fhod3Q76LL6 1578 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ube4aE9Q735 1028 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Sema3eP70275 775 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Asic4Q7TNS7 539 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Ehd2Q8BH64 543 aa8.1□□□□□ -1.11
Scn1a-202ENSMUST00000094951 Kiaa0556Q8C753 1610 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms