RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 TfrcQ62351 763 aaKnown RBP20.51■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Smarcc2Q6PDG5 1213 aa20.51■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 TrdnE9Q9K5 693 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 NmiO35309 314 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Tpm1P58771 284 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Tmem109Q3UBX0 243 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ifit1Q64282 463 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Zmynd15Q8C0R7 736 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Syt10Q9R0N4 523 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ddx46Q569Z5 1032 aaKnown RBP20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 ThemisQ8BGW0 636 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ptcd1Q8C2E4 695 aaKnown RBP20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Phf20l1Q8CCJ9 1013 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Phkg2Q9DB30 406 aa20.5■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 FosbP13346 338 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ap5z1Q3U829 807 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Slc39a6Q8C145 765 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Mb21d2Q8C525 428 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Q8C5K5 320 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Chmp7Q8R1T1 451 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Pcdhgc5Q91XW9 944 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Shank2Q80Z38 1476 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Irx2P81066 474 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Morc2aQ69ZX6 1030 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Mtmr3Q8K296 1196 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 LratQ9JI60 231 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 TefQ9JLC6 301 aa20.49■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Col14a1Q80X19 1797 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Prl7a2O54831 253 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 TrhQ62361 256 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Pcdhb15Q91Y04 786 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Pus3Q9JI38 481 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Tns3Q5SSZ5 1440 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Dzip1Q8BMD2 852 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Fam53cQ8BXQ8 393 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ccdc158Q8CDI6 1109 aa20.48■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Clec11aO88200 328 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 NpeppsQ11011 920 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Dnaaf4Q8R368 420 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 TkfcQ8VC30 578 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 RbsnQ80Y56 783 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Dnaaf2Q8BPI1 814 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Spata32Q8C5V0 334 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 PigbQ9JJQ0 542 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Dnajc2P54103 621 aaKnown RBP20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Lrrc8aQ80WG5 810 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Frmd3Q8BHD4 595 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Rassf8Q8CJ96 419 aa20.47■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Mrpl44Q9CY73 333 aaKnown RBP20.46■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Mtx1P47802 317 aa20.46■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ubxn4Q8VCH8 506 aa20.46■□□□□ 0.87
Col4a3bp-201ENSMUST00000077672 Ccdc112A0AUP1 442 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 AppP12023 770 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Cyp2d10P24456 504 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Paxbp1P58501 919 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Soga3Q6NZL0 945 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Arid5bQ8BM75 1188 aaKnown RBP20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ift57Q8BXG3 429 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 OptnQ8K3K8 584 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ric1Q69ZJ7 1422 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Rimbp3Q3V0F0 1606 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Siglec1Q62230 1695 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ccdc129Q14B48 1034 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ube2oQ6ZPJ3 1288 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Hook1Q8BIL5 728 aa20.45■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Serpinb6bO08804 377 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Surf1P09925 306 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Arglu1Q3UL36 271 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Nxf7Q80SZ6 620 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Snw1Q9CSN1 536 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Sh3bp5Q9Z131 463 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Tjp1P39447 1745 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ppfia3P60469 1194 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Cct2P80314 535 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Gnat3Q3V3I2 354 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Gm21985Q6P6P5 1106 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 CrebrfQ8CDG5 640 aaKnown RBP20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Gm11983V9GXS8 105 aa20.44■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Erc1Q99MI1 1120 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Odf2lQ9D478 642 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Bcl9Q9D219 1425 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Stx1aO35526 288 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Rgs9O54828 675 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Rrp1P56183 494 aaKnown RBP20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Exosc10P56960 887 aaKnown RBP20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Frat1P70339 274 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Nlrp1aQ2LKU9 1182 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Cdca8Q8BHX3 289 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Trim59Q922Y2 403 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Dusp10Q9ESS0 483 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Col22a1E9Q7P1 1613 aa20.43■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Zpr1Q62384 459 aa20.42■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Atp1a3Q6PIC6 1013 aa20.42■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Cnpy2Q9QXT0 182 aa20.42■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Casz1Q9CWL2 1761 aa20.42■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Ica1lQ3TY65 431 aa20.41■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Golim4Q8BXA1 655 aa20.41■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 Kcnk13Q8R1P5 405 aa20.41■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 BrapQ99MP8 591 aa20.41■□□□□ 0.86
Col4a3bp-201ENSMUST00000077672 CrklP47941 303 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms