RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Itga6Q61739 1091 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ccdc82Q6PG04 518 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Dcaf5Q80T85 946 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ufl1Q8CCJ3 793 aaKnown RBP8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Plekho1Q9JIY0 408 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cdc45Q9Z1X9 566 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Adcy9P51830 1353 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Gm9992B2RWK3 458 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Stx8O88983 236 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 CebpzP53569 1052 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ccdc129Q14B48 1034 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Fam228bQ497Q6 232 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Unc93aQ710D3 458 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Trim56Q80VI1 734 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Znf428Q8C1M2 176 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Adam1bQ8R534 806 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Mrpl44Q9CY73 333 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 ParvgQ9ERD8 331 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 RictorQ6QI06 1708 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Rad17Q6NXW6 688 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ppp4r3aQ6P2K6 820 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Tmem119Q8R138 280 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Slc14a2Q8R4T9 930 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Lrrc59Q922Q8 307 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Znf704Q9ERQ3 566 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Hmg20bQ9Z104 317 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Arhgef28P97433 1693 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Parp14Q2EMV9 1817 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 AceP09470 1312 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 4930407I10RikD3Z5T8 1512 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zscan29E9Q5B4 869 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ftl2P49945 183 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Eif5P59325 429 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 LyarQ08288 388 aaKnown RBP8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Tshz2Q68FE9 1030 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Esco1Q69Z69 843 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Acnat2Q8BGG9 420 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Fam43aQ8BUP8 424 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Hdac6Q9Z2V5 1149 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Sipa1l1Q8C0T5 1782 aa8.08□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Dip2aQ8BWT5 1523 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Abcc4E9Q236 1325 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Elmsan1E9Q2I4 1089 aaKnown RBP8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Speer4dL7N216 212 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Metap2O08663 478 aaKnown RBP8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Usp25P57080 1055 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zdhhc9P59268 364 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ppp1r10Q80W00 888 aaKnown RBP8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Vps16Q920Q4 839 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Tubb6Q922F4 447 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zbtb43Q9DAI4 467 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Hmgn5Q9JL35 406 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Aox2Q5SGK3 1345 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Wdr33Q8K4P0 1330 aaKnown RBP8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Dhx8A2A4P0 1244 aaKnown RBP8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Gm29094F6Q785 221 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Slc4a4O88343 1079 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Sgsm2Q80U12 1005 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Fam160b2Q80YR2 744 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 MthfsQ9D110 203 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Igbp1bQ9QZ29 343 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Sel1lQ9Z2G6 790 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zkscan7E9PVW1 718 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 TsksO54887 585 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 FanccP50652 591 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Slfnl1Q8BHW9 410 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Vps53Q8CCB4 832 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Riok1Q922Q2 567 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Letm1Q9Z2I0 738 aa8.07□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Myom1Q62234 1667 aaKnown RBP8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Nlrp9aQ66X03 949 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Tmx1Q8VBT0 278 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Iqca1Q9CUL5 857 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Cnpy2Q9QXT0 182 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zscan20B2KFW1 1030 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Cavin1O54724 392 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 EzrP26040 586 aaKnown RBP8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Gpr182P43142 395 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Zfp91Q62511 572 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Rbm26Q6NZN0 1012 aaKnown RBP8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 9230110C19RikQ8CC70 267 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Srgap1Q91Z69 1062 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Dbndd1Q9CZ00 160 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 RarsQ9D0I9 660 aaKnown RBP8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 DnmbpQ6TXD4 1580 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 InsrrQ9WTL4 1300 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Sik1Q60670 779 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ripor2Q80U16 1078 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ttc12Q8BW49 704 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ccar2Q8VDP4 922 aaKnown RBP8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Rdm1Q9CQK3 281 aa8.06□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Ino80Q6ZPV2 1559 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Bin2D3Z6Q9 489 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Prl3d2F6R3P9 224 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 CltaO08585 235 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Mapkapk5O54992 473 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Cdcp1Q5U462 833 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Nxf7Q80SZ6 620 aaKnown RBP8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 Fbxo3Q9DC63 480 aa8.05□□□□□ -1.12
Col6a6-201ENSMUST00000060896 MypnQ5DTJ9 1315 aa8.05□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 124.4 ms