RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Jade2Q6ZQF7 829 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 4931400O07RikQ9D4M5 137 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Tbc1d8Q9Z1A9 1134 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Gnat2P50149 354 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Sun3Q5SS91 320 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Olfm5Q8BU90 496 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Pm20d1Q8C165 503 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Mlh1Q9JK91 760 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Bms1Q6PGF5 1284 aaKnown RBP21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Dhx38Q80X98 1228 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Lman1Q9D0F3 517 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Cdcp1Q5U462 833 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Asic4Q7TNS7 539 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Clip2Q9Z0H8 1047 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Eya2O08575 532 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Pcdhb5Q91XZ5 792 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Prl3d3A0A0M6L0J6 224 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Tti2Q8BGV4 512 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Gjc1P28229 396 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Rtn1Q8K0T0 780 aa21.06■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Spocd1B1ASB6 936 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Liat1Q810M6 228 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Lrrc2Q8VDB8 371 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 RragbQ6NTA4 374 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Zkscan7E9PVW1 718 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Atp2b1G5E829 1220 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Anxa1P10107 346 aaKnown RBP21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Arhgef1Q61210 920 aaKnown RBP21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Pdzrn3Q69ZS0 1063 aa21.05■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Prl3d2F6R3P9 224 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ets1P27577 440 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Akr1c19G3X9Y6 323 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Hvcn1Q3U2S8 269 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 MycbpapQ5SUV2 932 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 9230110C19RikQ8CC70 267 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Gcc2Q8CHG3 1679 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Pkd2l2Q9JLG4 621 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Gm10093D3YYI8 482 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Hdac1O09106 482 aaKnown RBP21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Smarcc2Q6PDG5 1213 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Pde3aQ9Z0X4 1141 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Fam208aQ69ZR9 1610 aaKnown RBP21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Kdm2bQ6P1G2 1309 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Mapkapk5O54992 473 aa21.04■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Atp6v1aP50516 617 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Sik1Q60670 779 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Edc3Q8K2D3 508 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 A0A1W2P7S8 802 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Catsper2A2ARP9 588 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Cdc5lQ6A068 802 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ankrd1Q9CR42 319 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Calm1P0DP26 149 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Calm2P0DP27 149 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Calm3P0DP28 149 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 GnaqP21279 359 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 MarcksP26645 309 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Abcf1Q6P542 837 aaKnown RBP21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 MicalclQ9D5U9 680 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Cfap53Q9D439 514 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Hs6st3Q9QYK4 470 aa21.03■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ano1Q8BHY3 960 aa21.02■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Lmo7E9PYF4 1699 aaKnown RBP21.02■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ankrd40Q5SUE8 363 aa21.02■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Adamts12Q811B3 1600 aa21.02■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Dydc1Q9D9T0 175 aa21.02■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Prdm1Q60636 856 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Sp4Q62445 782 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Clcn1Q64347 994 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Krt79Q8VED5 531 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Fam135bQ9DAI6 1403 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Gm30191A0A0U1RNT7 187 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Ccdc112A0AUP1 442 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Cetn1P41209 172 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Syt1P46096 421 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Usp25P57080 1055 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Map9Q3TRR0 646 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Tspyl3Q3UYP3 334 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Mmel1Q9JLI3 765 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 NppbP40753 121 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Eif4a1P60843 406 aaKnown RBP21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Atp8b3Q6UQ17 1335 aa21.01■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Rad17Q6NXW6 688 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Acnat2Q8BGG9 420 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Large2Q5XPT3 690 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Terf2ipQ91VL8 393 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Lonrf3Q9D4H7 753 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Adora1Q60612 326 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Stox1B2RQL2 990 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Gdpd2Q9ESM6 539 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Stk36Q69ZM6 1316 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Ttc14Q9CSP9 761 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Rufy3Q9D394 469 aa21■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Mast3Q3U214 1321 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Eid1Q9DCR4 169 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 AlkP97793 1621 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Armc3A2AU72 881 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 TsksO54887 585 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 HellsQ60848 821 aa20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Ctnnbl1Q9CWL8 563 aaKnown RBP20.99■□□□□ 0.95
Scaf11-201ENSMUST00000047835 Cwc15Q9JHS9 229 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms