RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Atg4a-psA0A0G2JFS9 396 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Atg4aQ8C9S8 396 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Mlh1Q9JK91 760 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Tmod2Q9JKK7 351 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Igbp1bQ9QZ29 343 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Adamts13Q769J6 1426 aa13.78□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Myo5cE9Q1F5 1742 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 ParnQ8VDG3 624 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Hdac9Q99N13 588 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Abtb2Q7TQI7 1024 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Olfm5Q8BU90 496 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 Setd1aE9PYH6 1716 aa13.77□□□□□ -0.2
Pcif1-201ENSMUST00000041643 AdgbG3UZ78 1657 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Lrrfip1Q3UZ39 729 aaKnown RBP13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Bag4Q8CI61 457 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Lrrfip2Q91WK0 415 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Dip2aQ8BWT5 1523 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 A0A1W2P7S8 802 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Nap1l1P28656 391 aaKnown RBP13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cdc5lQ6A068 802 aaKnown RBP13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Lmbrd2Q8C561 694 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cep89Q9CZX2 791 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 TsksO54887 585 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mcm3P25206 812 aaKnown RBP13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Commd10Q8JZY2 202 aa13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Edc3Q8K2D3 508 aaKnown RBP13.77□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Stxbp4Q9WV89 557 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Anxa1P10107 346 aaKnown RBP13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Iqsec3Q3TES0 1195 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 PigbQ9JJQ0 542 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ccdc150Q8CDI7 1110 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Plekhg2Q6KAU7 1340 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Arhgef28P97433 1693 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ampd3O08739 766 aa13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Api5O35841 504 aaKnown RBP13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Znhit6Q3UFB2 460 aaKnown RBP13.76□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ccdc85cE9Q6B2 420 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Fchsd1Q6PFY1 688 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ppp1r10Q80W00 888 aaKnown RBP13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Brinp3Q499E0 766 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Pdzrn3Q69ZS0 1063 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Bend3Q6PAL0 825 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tmem119Q8R138 280 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cap2Q9CYT6 476 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Homer1Q9Z2Y3 366 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tbc1d8bA3KGB4 1114 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tlr7P58681 1050 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Kmt5bQ3U8K7 883 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tti2Q8BGV4 512 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cfap45Q9D9U9 551 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ppfibp2O35711 882 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Atf5O70191 283 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Abcd1P48410 736 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Dnajc5P60904 198 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Zbtb40Q6PCS8 1258 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Col1a2Q01149 1372 aa13.75□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Dnajc5gQ8C632 165 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Dnm1P39053 867 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Bms1Q6PGF5 1284 aaKnown RBP13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Adck5Q80V03 582 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Brms1Q99N20 246 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Atp8a2P98200 1148 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Znf692Q3U381 531 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Slu7Q8BHJ9 585 aa13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 HmcesQ8R1M0 353 aaKnown RBP13.74□□□□□ -0.21
Pcif1-201ENSMUST00000041643 1700029H14RikE9PY36 240 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Prdm11A2AGX3 565 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Fam184aE9PW83 1143 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Taf3Q5HZG4 932 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Map7d2A2AG50 781 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Myl3P09542 204 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cep120Q7TSG1 988 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tbc1d5Q80XQ2 815 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Larp6Q8BN59 492 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Plagl1Q9JLQ4 704 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mast3Q3U214 1321 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mtmr3Q8K296 1196 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Zkscan16A2ALW2 728 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tbc1d2bQ3U0J8 965 aa13.73□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tpx2A2APB8 745 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Mapkapk5O54992 473 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 NefhP19246 1090 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cdkn1cP49919 348 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tnnt2P50752 301 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Hs2st1Q8R3H7 356 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Tmc2Q8R4P4 888 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Luzp1Q8R4U7 1068 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Srgap1Q91Z69 1062 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Ttc37F8VPK0 1563 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Cep170bQ80U49 1574 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Arid4aF8VPQ2 1261 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 TrhQ62361 256 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Kank4Q6P9J5 1016 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Pcdhb5Q91XZ5 792 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Xrn1P97789 1719 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 HmmrQ00547 794 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Atp2b4Q6Q477 1205 aa13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 SrrtQ99MR6 875 aaKnown RBP13.72□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Atp6v1aP50516 617 aaKnown RBP13.71□□□□□ -0.21
Pcif1-201ENSMUST00000041643 Zbtb38Q3LR78 1197 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms