RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Rtn1Q8K0T0 780 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Sept14Q9DA97 430 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tmem94Q7TSH8 1360 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zkscan16A2ALW2 728 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zfpm1O35615 995 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Kiaa1524Q8BWY9 907 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Capn12Q9ER56 720 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Atp10dQ8K2X1 1416 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gimap8Q75N62 688 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Acbd3Q8BMP6 525 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gapvd1Q6PAR5 1458 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Atp8b3Q6UQ17 1335 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Atf7ipQ7TT18 1306 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gm3409A0A0G2JE67 319 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ccnl1Q52KE7 532 aaKnown RBP11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Rdm1Q9CQK3 281 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Letm1Q9Z2I0 738 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Naip7Q9JIB3 1402 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Naip6Q9JIB6 1403 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ppp4r3aQ6P2K6 820 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Shtn1Q8K2Q9 631 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Cavin2Q63918 418 aaKnown RBP11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Znf526Q8BI66 675 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tsr2Q8C8T8 191 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Thoc2B1AZI6 1594 aaKnown RBP11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Kifc2O08672 792 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Chmp6P0C0A3 200 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Serpinc1P32261 465 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Cnpy2Q9QXT0 182 aa11.16□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gm10378F6XQQ1 160 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Clul1Q3ZRW6 464 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Bicd1Q8BR07 835 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Nek11Q8C0Q4 628 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tmco5aQ9D9D5 303 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Sec62Q8BU14 398 aaKnown RBP11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Samd15F6XZJ7 620 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gramd4Q8CB44 633 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Myl6bQ8CI43 207 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Terf2ipQ91VL8 393 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ube3aO08759 870 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Frat1P70339 274 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gzf1Q4VBD9 706 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 Mapkbp1Q6NS57 1503 aa11.15□□□□□ -0.62
Syne1-201ENSMUST00000041639 SlmapQ3URD3 845 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Uba5Q8VE47 403 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Zmym3Q9JLM4 1370 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 GnaqP21279 359 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Kif2aP28740 705 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc25Q78PG9 208 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ublcp1Q8BGR9 318 aa11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 Bicc1Q99MQ1 977 aaKnown RBP11.15□□□□□ -0.63
Syne1-201ENSMUST00000041639 DesP31001 469 aaKnown RBP11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Pla2g4fQ50L41 855 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 MycbpapQ5SUV2 932 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Igbp1Q61249 340 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Usp11Q99K46 921 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Fam213aQ9CYH2 218 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 NmiO35309 314 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ubash3aQ3V3E1 624 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Pex1Q5BL07 1284 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Pram1Q6BCL1 675 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Asic3Q6X1Y6 530 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Lmbrd2Q8C561 694 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Mlh1Q9JK91 760 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 AdnpQ9Z103 1108 aaKnown RBP11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 3425401B19RikD3Z1D3 1412 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Zfp213E9QAW0 468 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Dync1i1O88485 628 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cep19Q9CQA8 163 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ppp1r9aH3BJD6 1292 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Jade3Q6IE82 823 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Lrrc2Q8VDB8 371 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Grpel1Q99LP6 217 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 BrapQ99MP8 591 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gm28510A0A087WP28 240 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tex13c2A0A0G2JGA3 530 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Vps36Q91XD6 386 aa11.14□□□□□ -0.63
Syne1-201ENSMUST00000041639 Zfp397Q7TNK4 527 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tacc2Q9JJG0 1149 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Vps54Q5SPW0 977 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tekt3Q6X6Z7 490 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Egfem1Q8C088 590 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ubxn1Q922Y1 297 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tubb4aQ9D6F9 444 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Atp12aQ9Z1W8 1035 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 U2af2P26369 475 aaKnown RBP11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Slc4a8Q8JZR6 1089 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Lztfl1Q9JHQ5 299 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gbp1Q01514 589 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tcerg1lQ3B807 590 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Spa17Q62252 149 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Casp1P29452 402 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Map3k11Q80XI6 850 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gys2Q8VCB3 704 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Slc5a4bQ91ZP4 660 aa11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ythdc2B2RR83 1445 aaKnown RBP11.13□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rasal2E9PW37 1286 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Calm1P0DP26 149 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Calm2P0DP27 149 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Calm3P0DP28 149 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms