RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Ano10Q8BH79 659 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Erc1Q99MI1 1120 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Mrpl44Q9CY73 333 aaKnown RBP22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Txnrd1Q9JMH6 613 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 InsrrQ9WTL4 1300 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Zscan29E9Q5B4 869 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Iqsec3Q3TES0 1195 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Ano6Q6P9J9 911 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 4930504O13RikQ8C5Z9 145 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Otud6bQ8K2H2 294 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Mst1rQ62190 1378 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Lnx1O70263 728 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Usp44Q8C2S0 711 aa22.35■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Usp28Q5I043 1051 aa22.34■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 DbnlQ62418 436 aa22.34■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Ddx54Q8K4L0 874 aaKnown RBP22.34■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Nyap1Q6PFX7 833 aa22.33■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Pdia6Q922R8 440 aaKnown RBP22.33■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 BrapQ99MP8 591 aa22.33■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Creld2Q9CYA0 350 aa22.33■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 TefQ9JLC6 301 aa22.33■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Lrrc8aQ80WG5 810 aa22.33■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Gpatch3Q8BIY1 525 aa22.33■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Casz1Q9CWL2 1761 aa22.33■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 IbspQ61711 324 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ppp4r3aQ6P2K6 820 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ggt6Q6PDE7 497 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Tjp1P39447 1745 aaKnown RBP22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Slu7Q8BHJ9 585 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Lrrfip2Q91WK0 415 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Pdzd9Q9D9M4 266 aa22.32■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Neurod6P48986 337 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 GpkowQ56A08 488 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Cep135Q6P5D4 1140 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Nlrp3Q8R4B8 1033 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 TkfcQ8VC30 578 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Nlrp1aQ2LKU9 1182 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Zkscan4Q5SZT6 480 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Zfp397Q7TNK4 527 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ccdc158Q8CDI6 1109 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Chmp7Q8R1T1 451 aa22.31■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Kansl3A2RSY1 903 aaKnown RBP22.3■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 U2af2P26369 475 aaKnown RBP22.3■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ccdc155Q80VJ8 648 aa22.3■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Nhsl1Q8CAF4 1587 aa22.3■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Slx1bQ8BX32 270 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Q8C5K5 320 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Trim59Q922Y2 403 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Kcnd1Q03719 651 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Gnat3Q3V3I2 354 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Adora1Q60612 326 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Rufy2Q8R4C2 606 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Cntnap1O54991 1385 aa22.29■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Gm10471E9Q1C7 252 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Sema6bO54951 886 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Gm21985Q6P6P5 1106 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ripor2Q80U16 1078 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Kcnk13Q8R1P5 405 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Col4a3bpQ9EQG9 624 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Sh3bp5Q9Z131 463 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Dhx8A2A4P0 1244 aaKnown RBP22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ddx58Q6Q899 926 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Ptcd1Q8C2E4 695 aaKnown RBP22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Mb21d2Q8C525 428 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Vps33aQ9D2N9 598 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Tulp1Q9Z273 543 aa22.28■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Col15a1O35206 1367 aa22.27■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Srek1Q8BZX4 494 aaKnown RBP22.27■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Rassf8Q8CJ96 419 aa22.27■■□□□ 1.16
Ccdc50-201ENSMUST00000039443 Pard3Q99NH2 1333 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Snw1Q9CSN1 536 aaKnown RBP22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Tcof1O08784 1320 aaKnown RBP22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Card6E9PWH2 1175 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Nfatc2ipO09130 412 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Tpm1P58771 284 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ube2oQ6ZPJ3 1288 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Naa16Q9DBB4 864 aa22.26■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 MypnQ5DTJ9 1315 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Exosc10P56960 887 aaKnown RBP22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 ThemisQ8BGW0 636 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Q8BZJ8 459 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Emilin2Q8K482 1074 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Phkg2Q9DB30 406 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Telo2Q9DC40 840 aaKnown RBP22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Cnnm1Q0GA42 951 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ncaph2Q8BSP2 607 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 CenpqQ9CPQ5 267 aa22.25■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Prl7a2O54831 253 aa22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Vps54Q5SPW0 977 aa22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ankle2Q6P1H6 964 aa22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Dhx40Q6PE54 779 aaKnown RBP22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Dis3l2Q8CI75 870 aaKnown RBP22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Pcdhb15Q91Y04 786 aa22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Pes1Q9EQ61 584 aaKnown RBP22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Sos2Q02384 1333 aa22.24■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ess2O70279 479 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Tmem87aQ8BXN9 555 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Atad2Q8CDM1 1040 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Ccer1Q9CQL2 403 aa22.23■■□□□ 1.15
Ccdc50-201ENSMUST00000039443 Wdr19Q3UGF1 1341 aa22.23■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms