RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Lrrfip2Q91WK0 415 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Anapc16Q9CPV2 110 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ubl4bQ9CQ84 188 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ndufb9Q9CQJ8 179 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ddx56Q9D0R4 546 aaKnown RBP6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Tmem52Q9D702 196 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Srcin1Q9QWI6 1250 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 MthfrQ9WU20 654 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Wnt8bQ9WUD6 350 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 ApipQ9WVQ5 241 aa6.39□□□□□ -1.39
Clk1-201ENSMUST00000034868 Golga3P55937 1487 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Alpk3Q924C5 1678 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Lrrc63A6H694 637 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Lekr1B2RVN1 116 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Slc4a9E9PUP3 929 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 LtkP08923 888 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Hmx2P43687 273 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Hcls1P49710 486 aaKnown RBP6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Art1Q60935 325 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 U2surpQ6NV83 1029 aaKnown RBP6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ccdc85bQ6PDY0 202 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Clca4aQ6Q473 924 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Cand2Q6ZQ73 1235 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Tmem260Q8BMD6 703 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Epb41l3Q9WV92 929 aa6.38□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ccdc173A0JLY1 547 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Gm8257E9Q8R3 264 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Slc39a2G3X943 309 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Zfp994J3QM38 661 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ccer2J3QPU5 274 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 AoahO35298 574 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Stat1P42225 749 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Bach2P97303 839 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 MENTQ569E4 350 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Moxd2Q7TT41 619 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Bsdc1Q80Y55 427 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Commd10Q8JZY2 202 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 RhovQ8VDU1 236 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ankrd49Q8VE42 238 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Kcnq5Q9JK45 933 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Dnajc7Q9QYI3 494 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 PtprtQ99M80 1454 aa6.37□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ttll10A4Q9F3 704 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Fgfr1P16092 822 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Esco1Q69Z69 843 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Tmem106cQ80VP8 260 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Tspan18Q80WR1 248 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Liat1Q810M6 228 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Tmx2Q9D710 295 aaKnown RBP6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Rnf14Q9JI90 485 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 RfxankQ9Z205 269 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 1700011I03RikE9PYL8 271 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Olfr414E9Q5P8 317 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Aldh2P47738 519 aaKnown RBP6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Foxd3Q61060 465 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Cyp7a1Q64505 503 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Adam1bQ8R534 806 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Apbb1ipQ8R5A3 670 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Pcdhb11Q91UZ8 797 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Dcp1aQ91YD3 602 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ipo9Q91YE6 1041 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 Clcn2Q9R0A1 908 aa6.36□□□□□ -1.39
Clk1-201ENSMUST00000034868 ArafP04627 604 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Man1a2P39098 641 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Pip5k1aP70182 546 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Trim75Q3UWZ0 467 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Fchsd1Q6PFY1 688 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Trpm4Q7TN37 1213 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Gpr62Q80UC6 358 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Samm50Q8BGH2 469 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Zbtb9Q8CDC7 459 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Rnf219Q8K2Y0 722 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Emilin1Q99K41 1017 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Ripk4Q9ERK0 786 aa6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Phldb1Q6PDH0 1371 aaKnown RBP6.35□□□□□ -1.39
Clk1-201ENSMUST00000034868 Eif4g3Q80XI3 1579 aaKnown RBP6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Zscan20B2KFW1 1030 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 CtshP49935 333 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Q66JV7 365 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Cep70Q6IQY5 616 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Mpp4Q6P7F1 635 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Pdcd2lQ8C5N5 364 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Otud6bQ8K2H2 294 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Gtf2h3Q8VD76 309 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Pabpc6Q9D4E6 643 aaKnown RBP6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Appbp2Q9DAX9 585 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Atad2bE9Q166 1460 aaKnown RBP6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Il16O54824 1322 aa6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Brd4Q9ESU6 1400 aaKnown RBP6.34□□□□□ -1.39
Clk1-201ENSMUST00000034868 Gm5580A0A0N4SVP8 411 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Gm10093D3YYI8 482 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Cald1E9QA15 768 aaKnown RBP6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Birc3O08863 600 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Hdac1O09106 482 aaKnown RBP6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Top1Q04750 767 aaKnown RBP6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Q4VA45 678 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 IbspQ61711 324 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Mapre3Q6PER3 281 aa6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Wdr43Q6ZQL4 677 aaKnown RBP6.34□□□□□ -1.4
Clk1-201ENSMUST00000034868 Tmc4Q7TQ65 694 aa6.34□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms