RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Rbm17Q8JZX4 405 aaKnown RBP17.76■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Mctp1E9PV86 951 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 NcapgE9PWG6 1004 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Limch1Q3UH68 1057 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Fam213aQ9CYH2 218 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Tiam2Q6ZPF3 1715 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Gsdma2Q32M21 443 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Hspd1P63038 573 aaKnown RBP17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Cct2P80314 535 aaKnown RBP17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ifit1Q64282 463 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Gm21985Q6P6P5 1106 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ehd4Q9EQP2 541 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 DmtnQ9WV69 405 aa17.75■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Klhl34A2AI76 644 aa17.74■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ercc3P49135 783 aa17.74■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Pes1Q9EQ61 584 aaKnown RBP17.74■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Csrnp1P59054 583 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Igflr1Q3U4N7 345 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Smarcc2Q6PDG5 1213 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Asap2Q7SIG6 958 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ttc27Q8CD92 847 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Sh3bgrQ9WUZ7 214 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 1700113H08RikE9Q9Q5 327 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Slc4a1P04919 929 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Tmem266Q8BZB3 538 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Pms1Q8K119 917 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Acsbg1Q99PU5 721 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Rdm1Q9CQK3 281 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Mrc1Q61830 1456 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 TrdnE9Q9K5 693 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Cfap157Q0VFX2 523 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Pknox2Q8BG99 474 aa17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Rtn4Q99P72 1162 aaKnown RBP17.73■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Usp28Q5I043 1051 aa17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Tex2Q6ZPJ0 1128 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Nxf7Q80SZ6 620 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Trim56Q80VI1 734 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 AidaQ8C4Q6 305 aa17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Ncoa5Q91W39 579 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Npc1l1Q6T3U4 1333 aa17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 HdgfP51859 237 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Pip4k2bQ80XI4 416 aa17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 BrapQ99MP8 591 aa17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Mrpl44Q9CY73 333 aaKnown RBP17.72■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Exosc10P56960 887 aaKnown RBP17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 TrhQ62361 256 aa17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Kansl3A2RSY1 903 aaKnown RBP17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Adam1aQ60813 791 aa17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Oxsr1Q6P9R2 527 aa17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Fsd1Q7TPM6 496 aa17.71■□□□□ 0.43
Nkx3-1-201ENSMUST00000022646 Cspp1B2RX88 1205 aa17.71■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Kcnf1Q7TSH7 493 aa17.71■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Tmem67Q8BR76 992 aa17.71■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Abca3Q8R420 1704 aa17.71■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Usp42B2RQC2 1324 aaKnown RBP17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 TnksQ6PFX9 1320 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cfap58B2RW38 873 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Gm12185Q5NCB2 835 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 AbraQ8BUZ1 375 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ciao1Q99KN2 339 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cyp2d34L7N463 504 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Hmx1O70218 332 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 BcanQ61361 883 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Spty2d1Q68FG3 682 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cadps2Q8BYR5 1297 aa17.7■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Atad2Q8CDM1 1040 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Rufy2Q8R4C2 606 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cap2Q9CYT6 476 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cavin1O54724 392 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Hand2Q61039 217 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Mtmr3Q8K296 1196 aa17.69■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ncbp1Q3UYV9 790 aaKnown RBP17.68■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Nol10Q5RJG1 687 aaKnown RBP17.68■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 CrebrfQ8CDG5 640 aaKnown RBP17.68■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ptgs1P22437 602 aa17.68■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Pde3aQ9Z0X4 1141 aa17.68■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Wdr78E9PYY5 807 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Rgs9O54828 675 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ccnl1Q52KE7 532 aaKnown RBP17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Mctp2Q5RJH2 878 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Smg7Q5RJH6 1138 aaKnown RBP17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Plcd3Q8K2J0 785 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Trim59Q922Y2 403 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ncaph2Q8BSP2 607 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 IncenpQ9WU62 880 aa17.67■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 CebpzP53569 1052 aaKnown RBP17.66■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 ZgpatQ8VDM1 511 aa17.66■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Hmgn5Q9JL35 406 aa17.66■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 GptQ8QZR5 496 aa17.66■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Nop14Q8R3N1 860 aaKnown RBP17.66■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ccdc112A0AUP1 442 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cyp3a57D3YYZ0 503 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Gm29094F6Q785 221 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Anxa1P10107 346 aaKnown RBP17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Nucb2P81117 420 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Rab3gap1Q80UJ7 981 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Slx1bQ8BX32 270 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 MthfsQ9D110 203 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 DccP70211 1447 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Cdhr2E9Q7P9 1308 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms