RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 CtifQ6PEE2 600 aaKnown RBP12.04□□□□□ -0.48
Clip3-201ENSMUST00000014065 Rec8Q8C5S7 591 aa12.04□□□□□ -0.48
Clip3-201ENSMUST00000014065 Hps3Q91VB4 1002 aa12.04□□□□□ -0.48
Clip3-201ENSMUST00000014065 Bmp2kQ91Z96 1138 aa12.04□□□□□ -0.48
Clip3-201ENSMUST00000014065 Serpinb6bO08804 377 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Trim25Q61510 634 aaKnown RBP12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Q8BZJ8 459 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Clstn1Q9EPL2 979 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Chd2E9PZM4 1827 aaKnown RBP12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 U2af1l4Q8BGJ9 220 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Larp6Q8BN59 492 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Tbc1d7Q9D0K0 293 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Nfatc2ipO09130 412 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Cplx1P63040 134 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Xpo4Q9ESJ0 1151 aa12.03□□□□□ -0.48
Clip3-201ENSMUST00000014065 Adamtsl3G3UXC7 1706 aa12.02□□□□□ -0.48
Clip3-201ENSMUST00000014065 LyarQ08288 388 aaKnown RBP12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gimap6Q8K349 305 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Vps18Q8R307 973 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Col4a3bpQ9EQG9 624 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Stxbp4Q9WV89 557 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Tnrc6bQ8BKI2 1810 aaKnown RBP12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ccdc129Q14B48 1034 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 AidaQ8C4Q6 305 aa12.02□□□□□ -0.49
Clip3-201ENSMUST00000014065 Fam170aQ66LM6 333 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ehd2Q8BH64 543 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Kcnq3Q8K3F6 873 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Terf2ipQ91VL8 393 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 XpcP51612 930 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 HellsQ60848 821 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ttc19Q8CC21 365 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Dnaaf4Q8R368 420 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 SdsQ8VBT2 327 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Kcnh5Q920E3 988 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gnl2Q99LH1 728 aaKnown RBP12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Pdzd9Q9D9M4 266 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Clic4Q9QYB1 253 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ccdc102aQ3TMW1 549 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Zkscan5Q9Z1D8 819 aa12.01□□□□□ -0.49
Clip3-201ENSMUST00000014065 Paxbp1P58501 919 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 GnpatP98192 678 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Tmem87bQ8BKU8 555 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Odf2lQ9D478 642 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Camta1A2A891 1682 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Klhl34A2AI76 644 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Rrp1P56183 494 aaKnown RBP12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Mcm6P97311 821 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Dhx40Q6PE54 779 aaKnown RBP12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Mb21d2Q8C525 428 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 SnrkQ8VDU5 748 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Aox2Q5SGK3 1345 aa12□□□□□ -0.49
Clip3-201ENSMUST00000014065 Trim56Q80VI1 734 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Srek1Q8BZX4 494 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ptcd1Q8C2E4 695 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Myo5bP21271 1818 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 TrdnE9Q9K5 693 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 PnnO35691 725 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Nbr1P97432 988 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Uri1Q3TLD5 531 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gnat3Q3V3I2 354 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Prpf4bQ61136 1007 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Spag5Q7TME2 1165 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ppp1r37Q8BKR5 712 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Tmc2Q8R4P4 888 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Lrrc2Q8VDB8 371 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Mns1Q61884 491 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Dzip1Q8BMD2 852 aa11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ddx41Q91VN6 622 aaKnown RBP11.99□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gm21698A0A087WQP8 267 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gm21671G3UY31 267 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Hspd1P63038 573 aaKnown RBP11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Dnajc2P54103 621 aaKnown RBP11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Sptlc2P97363 560 aaKnown RBP11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Znf532Q6NXK2 1036 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Cdca8Q8BHX3 289 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Pnpla2Q8BJ56 486 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Mei4Q8BRM6 389 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 BrapQ99MP8 591 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 A0A0U1RNP2 1173 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Gm29094F6Q785 221 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 NefhP19246 1090 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Acnat2Q8BGG9 420 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 ThemisQ8BGW0 636 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Dnm3Q8BZ98 863 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 TkfcQ8VC30 578 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Rbm33Q9CXK9 1231 aaKnown RBP11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 MthfsQ9D110 203 aa11.98□□□□□ -0.49
Clip3-201ENSMUST00000014065 Ubr1O70481 1757 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 CebpaP53566 359 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Eif5P59325 429 aaKnown RBP11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Nol10Q5RJG1 687 aaKnown RBP11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Cep55Q8BT07 462 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Fsd2Q8BZ52 692 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Zfp202Q8C879 641 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Tmem119Q8R138 280 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Sil1Q9EPK6 465 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Acot9Q9R0X4 439 aaKnown RBP11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Magi2Q9WVQ1 1275 aa11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Rreb1Q3UH06 1700 aaKnown RBP11.97□□□□□ -0.49
Clip3-201ENSMUST00000014065 Flt4P35917 1363 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms