RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fam102bQ8BQS4 339 aa22.08■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Kansl3A2RSY1 903 aaKnown RBP22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 CebpzP53569 1052 aaKnown RBP22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Golim4Q8BXA1 655 aa22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Rassf8Q8CJ96 419 aa22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Aox4Q3TYQ9 1336 aa22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Tmem109Q3UBX0 243 aa22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Mtmr3Q8K296 1196 aa22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Rrs1Q9CYH6 365 aaKnown RBP22.07■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 RgmbQ7TQ33 436 aa22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Rbm42Q91V81 474 aaKnown RBP22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm973E9Q295 1059 aa22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Exosc10P56960 887 aaKnown RBP22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm21985Q6P6P5 1106 aa22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Mrpl44Q9CY73 333 aaKnown RBP22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Osbpl5Q9ER64 874 aa22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Sh3bp5Q9Z131 463 aa22.06■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm21663A0A0G2JE01 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm7361D3Z6R1 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 5031410I06RikE9Q4E0 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm1979E9QAN3 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm5862K7N5V5 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Gm10220K7N660 267 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Slc5a1Q8C3K6 665 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 BrapQ99MP8 591 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Irx4Q9QY61 515 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Pde3aQ9Z0X4 1141 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Bcl9lQ67FY2 1494 aa22.05■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 MsnP26041 577 aaKnown RBP22.04■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Timm10P62073 90 aa22.04■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Ifit1Q64282 463 aa22.04■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Trim59Q922Y2 403 aa22.04■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Npc1l1Q6T3U4 1333 aa22.04■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Lekr1B2RVN1 116 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 AK157302I3ITR1 129 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Tsen34Q8BMZ5 316 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Lmbrd2Q8C561 694 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Isca1Q9D924 129 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Cwc25Q9DBF7 416 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Prl3d2F6R3P9 224 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Rgs9O54828 675 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Serpina10Q8R121 448 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Stard3nlQ9DCI3 235 aa22.03■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 FosbP13346 338 aa22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Cdk4P30285 303 aa22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Hspd1P63038 573 aaKnown RBP22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Nxf7Q80SZ6 620 aaKnown RBP22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Krt25Q8VCW2 446 aa22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Nrbp1Q99J45 535 aa22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Speer4bQ9D9F7 267 aa22.02■■□□□ 1.12
Shkbp1-201ENSMUST00000003857 Ccdc112A0AUP1 442 aa22.02■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Atad2Q8CDM1 1040 aa22.02■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Clec11aO88200 328 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Cct2P80314 535 aaKnown RBP22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Rdm1Q9CQK3 281 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ehd4Q9EQP2 541 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ltb4r2Q9JJL9 360 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Nwd2Q6P5U7 1742 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Oas2E9Q9A9 742 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Eya2O08575 532 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Pms1Q8K119 917 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Zeb2Q9R0G7 1215 aa22.01■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Usp42B2RQC2 1324 aaKnown RBP22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Tpd52l1O54818 204 aa22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 RdxP26043 583 aaKnown RBP22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Atf3Q60765 181 aa22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 TrhQ62361 256 aa22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Cdca8Q8BHX3 289 aa22■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Cyp2d34L7N463 504 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Asap2Q7SIG6 958 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ncaph2Q8BSP2 607 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Tmem266Q8BZB3 538 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Rbm17Q8JZX4 405 aaKnown RBP21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Rufy2Q8R4C2 606 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ubxn4Q8VCH8 506 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Tlcd1Q99JT6 247 aa21.99■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Myd88P22366 296 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Rrp1P56183 494 aaKnown RBP21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Gsdma2Q32M21 443 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ano6Q6P9J9 911 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Fsd1Q7TPM6 496 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ints5Q8CHT3 1018 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Pcdhb15Q91Y04 786 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Chmp3Q9CQ10 224 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Cdkn1cP49919 348 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 AidaQ8C4Q6 305 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Snw1Q9CSN1 536 aaKnown RBP21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ifi35Q9D8C4 286 aa21.98■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Slc4a1P04919 929 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Hook1Q8BIL5 728 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ciao1Q99KN2 339 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Syt10Q9R0N4 523 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Plekhd1B2RPU2 505 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Smc4Q8CG47 1286 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Adam1bQ8R534 806 aa21.97■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Stx1aO35526 288 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ltv1Q6NSQ7 470 aaKnown RBP21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ppil4Q9CXG3 492 aaKnown RBP21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Fam84aQ9D650 292 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Pes1Q9EQ61 584 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms