RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EGLN3Q9H6Z9 239 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 SMURF2Q9HAU4 748 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 CCM2LQ9NUG4 571 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 FAIMQ9NVQ4 179 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 TMEM38BQ9NVV0 291 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 NPAP1Q9NZP6 1156 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 PDP1Q9P0J1 537 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 DNAJB9Q9UBS3 223 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 ST6GALNAC2Q9UJ37 374 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 CDH10Q9Y6N8 788 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 DOPEY1Q5JWR5 2465 aa6.31□□□□□ -1.4
NPLOC4-221ENST00000625705 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ARPC4-TTLL3A0A0A6YYG9 625 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 IQCMA0A1B0GVH7 501 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 TCRBV3S1A0A5B6 114 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 PRSS37A4D1T9 235 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 DPRXA6NFQ7 191 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 RIIAD1A6NNX1 92 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 VSTM5A8MXK1 200 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ATP6V1G2-DDX39BF2Z307 99 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 HS3ST1O14792 307 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC16A7O60669 478 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 PLAUP00749 431 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 IFNGP01579 166 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 HLA-DQA2P01906 255 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF23P17027 643 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 RAB6AP20340 208 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 NPR2P20594 1047 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FASP25445 335 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 POU1F1P28069 291 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 CDAP32320 146 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ARR3P36575 388 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 GIPRP48546 466 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 GSSP48637 474 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 IST1P53990 364 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 GALK2Q01415 458 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SPOCK1Q08629 439 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 MSMPQ1L6U9 139 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 RFX4Q33E94 735 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 IQCCQ4KMZ1 466 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 C1orf94Q6P1W5 598 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 LEG1Q6P5S2 330 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF620Q6ZNG0 422 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 DPPA2Q7Z7J5 298 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 C10orf67Q8IYJ2 551 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FBXL14Q8N1E6 418 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC22A24Q8N4F4 322 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 CLDN22Q8N7P3 220 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 WDR31Q8NA23 367 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 LRRC75AQ8NAA5 344 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 OR4C15Q8NGM1 316 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF519Q8TB69 540 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 TMEM171Q8WVE6 324 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 HTRA1Q92743 480 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 STMN2Q93045 179 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 OTULINQ96BN8 352 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FEVQ99581 238 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SH3GL3Q99963 347 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FUZQ9BT04 418 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 BDH2Q9BUT1 245 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SYT4Q9H2B2 425 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 CDH20Q9HBT6 801 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 VNN3Q9NY84 501 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FBXL3Q9UKT7 428 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 MOKQ9UQ07 419 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 RNF114Q9Y508 228 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 AP4S1Q9Y587 144 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 HELZ2Q9BYK8 2649 aaKnown RBP6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
NPLOC4-221ENST00000625705 IGHV1-18A0A0C4DH31 117 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SLC22A23A1A5C7 686 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 FAM221AA4D161 298 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ARRDC5A6NEK1 342 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 C12orf71A8MTZ7 269 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 G3V2T6 193 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 AHCYL1O43865 530 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 SMPD2O60906 423 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 KHDRBS3O75525 346 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 PTHP01270 115 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 GASTP01350 101 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 TSPAN19P0C672 248 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CECR9P0C854 216 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 APEHP13798 732 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ANXA8P13928 327 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CBR1P16152 277 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ZNF3P17036 446 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 MSR1P21757 451 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 PAICSP22234 425 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 CRABP1P29762 137 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 APLNRP35414 380 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 FABP6P51161 128 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 HMGA2P52926 109 aa6.29□□□□□ -1.4
NPLOC4-221ENST00000625705 ART1P52961 327 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms