RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SRPX2O60687 465 aaPredicted RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 SERPINA5P05154 406 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ITGA5P08648 1049 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 TMEM35AQ53FP2 167 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 DCST2Q5T1A1 773 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CYB5R2Q6BCY4 276 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ADIPOR2Q86V24 386 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CHST4Q8NCG5 386 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 FAM46BQ96A09 425 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CCDC74AQ96AQ1 378 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 LMLNQ96KR4 655 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 RHOVQ96L33 236 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ZNF681Q96N22 645 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 SULT4A1Q9BR01 284 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CST11Q9H112 138 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ACKR4Q9NPB9 350 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CHRNA9Q9UGM1 479 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ICAM5Q9UMF0 924 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 METTL12A8MUP2 240 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 OIP5O43482 229 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 LDB3O75112 727 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 LYPD3O95274 346 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 FBP1P09467 338 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 TACSTD2P09758 323 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CYBAP13498 195 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 NME2P22392 152 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 RAB2AP61019 212 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 EXOSC7Q15024 291 aaKnown RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 ARHGAP11BQ3KRB8 267 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 NPAS4Q8IUM7 802 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 LRRC25Q8N386 305 aaPredicted RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 ZNF615Q8N8J6 731 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ALG12Q9BV10 488 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 SYT4Q9H2B2 425 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 GSKIPQ9P0R6 139 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 KLHDC2Q9Y2U9 406 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
PMS1-221ENST00000624204 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 DCDC2BA2VCK2 349 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CD74P04233 296 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CD79AP11912 226 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CDNFQ49AH0 187 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 LEG1Q6P5S2 330 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 DNM1P46Q6ZS02 220 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 PHB2Q99623 299 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 COMMD4Q9H0A8 199 aa13.78□□□□□ -0.2
PMS1-221ENST00000624204 CPMP14384 443 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 PI3P19957 117 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 WASP42768 502 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 RAB11BQ15907 218 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 KLHL26Q53HC5 615 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 NRROSQ86YC3 692 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 C15orf54Q8N8G6 183 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 CA5BP1Q8WTZ4 195 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 EDAQ92838 391 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 NECAB3Q96P71 396 aaPredicted RBP13.77□□□□□ -0.2
PMS1-221ENST00000624204 SMIM3Q9BZL3 60 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 FLRT3Q9NZU0 649 aa13.77□□□□□ -0.2
PMS1-221ENST00000624204 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
PMS1-221ENST00000624204 EIF2S3P41091 472 aaKnown RBP13.77□□□□□ -0.21
PMS1-221ENST00000624204 ARHGAP19Q14CB8 494 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 FIP1L1Q6UN15 594 aaKnown RBP13.77□□□□□ -0.21
PMS1-221ENST00000624204 TMPPEQ6ZT21 453 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 TAF8Q7Z7C8 310 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 GPX8Q8TED1 209 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 SEH1LQ96EE3 360 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 TGIF2Q9GZN2 237 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 ATXN7L1Q9ULK2 861 aaPredicted RBP13.77□□□□□ -0.21
PMS1-221ENST00000624204 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 OR1A2Q9Y585 309 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 A0A1W2PPH5 198 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 MED6O75586 246 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 AGR2O95994 175 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 CD1AP06126 327 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 THBS1P07996 1170 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 PSMB6P28072 239 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 NTHL1P78549 312 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 Q3ZCU0 254 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 DEFB134Q4QY38 66 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 IL34Q6ZMJ4 242 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 SEC61A2Q9H9S3 476 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
PMS1-221ENST00000624204 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
PMS1-221ENST00000624204 DNAJB6O75190 326 aa13.76□□□□□ -0.21
PMS1-221ENST00000624204 LSSP48449 732 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms