RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 MFSD12Q6NUT3 480 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 SDF2Q99470 211 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 RXFP3Q9NSD7 469 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 ZNF860A6NHJ4 632 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 H7C1C5 153 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 IGHV2-70P01814 119 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 PRF1P14222 555 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 EIF2S3P41091 472 aaKnown RBP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 VIPR2P41587 438 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 MECP2P51608 486 aaKnown RBP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 ACTBP60709 375 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 LCN6P62502 163 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 ACTG1P63261 375 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 REEP5Q00765 189 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 SQSTM1Q13501 440 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 TTLL10Q6ZVT0 673 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 POMGNT2Q8NAT1 580 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 SLC2A12Q8TD20 617 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 IL36AQ9UHA7 158 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 PLXNB3Q9ULL4 1909 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 PRR32B1ATL7 298 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 CDC40O60508 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 YIF1AO95070 293 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 SLC35G4P0C7Q5 338 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 BCL6P41182 706 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 TRMT12Q53H54 448 aaKnown RBP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 C12orf40Q86WS4 652 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 RNF113BQ8IZP6 322 aaKnown RBP13.23□□□□□ -0.29
SYNRG-225ENST00000619541 FAM3DQ96BQ1 224 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 RSPRY1Q96DX4 576 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 NUS1Q96E22 293 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 COMMD4Q9H0A8 199 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 FN3KRPQ9HA64 309 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 MMP26Q9NRE1 261 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 MSRAQ9UJ68 235 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 MYO9BQ13459 2157 aa13.23□□□□□ -0.29
SYNRG-225ENST00000619541 DCDC2BA2VCK2 349 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 RAB6AP20340 208 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PARGQ86W56 976 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 STX12Q86Y82 276 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 OR6N2Q8NGY6 317 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 CD300LFQ8TDQ1 290 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 SGK3Q96BR1 496 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PIK3IP1Q96FE7 263 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 MEGF10Q96KG7 1140 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PHB2Q99623 299 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 CMKLR1Q99788 373 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 RCC2Q9P258 522 aaKnown RBP13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ZNF432O94892 652 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 WNT11O96014 354 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 TACSTD2P09758 323 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
SYNRG-225ENST00000619541 SECTM1Q8WVN6 248 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PIGQQ9BRB3 760 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 CST11Q9H112 138 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 PRR13Q9NZ81 148 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 CNTRLQ7Z7A1 2325 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 KNL1Q8NG31 2342 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 A0A1B0GWA3 101 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 TMEM235A6NFC5 223 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 UBE2CO00762 179 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 NDUFB2O95178 105 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 HLA-DQA2P01906 255 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 DIO1P49895 249 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 S100A10P60903 97 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ZNF345Q14585 488 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 IRF4Q15306 451 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 RAB11BQ15907 218 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ANKRD16Q6P6B7 361 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 CLEC1AQ8NC01 280 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ROBO4Q8WZ75 1007 aa13.22□□□□□ -0.29
SYNRG-225ENST00000619541 NECAB3Q96P71 396 aaPredicted RBP13.22□□□□□ -0.29
SYNRG-225ENST00000619541 MRPS23Q9Y3D9 190 aaKnown RBP13.22□□□□□ -0.29
SYNRG-225ENST00000619541 ALKBH1Q13686 389 aaKnown RBP13.21□□□□□ -0.29
SYNRG-225ENST00000619541 ZNF813Q6ZN06 617 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 JAGN1Q8N5M9 183 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 HAO2Q9NYQ3 351 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
SYNRG-225ENST00000619541 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms