RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 H0YJX3 145 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 CLDN1O95832 211 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 GPANK1O95872 356 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 B4GALT1P15291 398 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 SPI1P17947 270 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 LAP3P28838 519 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 VHLP40337 213 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 ADARB1P78563 741 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 BCDIN3DQ7Z5W3 292 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 GLB1L2Q8IW92 636 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 C1orf162Q8NEQ5 155 aaPredicted RBP13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 LINC01560Q8TB33 94 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 TMEM163Q8TC26 289 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNRF4Q8WWF5 429 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 ADI1Q9BV57 179 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 RACGAP1Q9H0H5 632 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 IMPAD1Q9NX62 359 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 A0A1W2PR80 420 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR5H1A6NKK0 313 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 MPZL1O95297 269 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 CLIC3O95833 236 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SCG5P05408 212 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR8G3PP0DMU2 310 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 CAPGP40121 348 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 MRPS34P82930 218 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SORDQ00796 357 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 KEAP1Q14145 624 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SNCBQ16143 134 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 KLHL12Q53G59 568 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OTPQ5XKR4 325 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 IZUMO2Q6UXV1 221 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 FOXL2NBQ6ZUU3 175 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 C22orf34Q6ZV56 151 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SKA3Q8IX90 412 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 DEPDC4Q8N2C3 294 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 WDR31Q8NA23 367 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 BBS1Q8NFJ9 593 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR8J1Q8NGP2 316 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR52N5Q8NH56 324 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 WFIKKN1Q96NZ8 548 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SH3GL3Q99963 347 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 USB1Q9BQ65 265 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR10A4Q9H209 315 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SIAEQ9HAT2 523 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 POLE4Q9NR33 117 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC17A5Q9NRA2 495 aa13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-204ENST00000617222 DOPEY1Q5JWR5 2465 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TUBAL3A6NHL2 446 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 FARS2O95363 451 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 HLA-DQA2P01906 255 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 NPR2P20594 1047 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 HOXC12P31275 282 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 CAPZA2P47755 286 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 UBE2NP61088 152 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TUBA1BP68363 451 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TUBA4AP68366 448 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 GLO1Q04760 184 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TAB1Q15750 504 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TIMM23BQ5SRD1 257 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 C6orf52Q5T4I8 152 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 UGT2A3Q6UWM9 527 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 TUBA1AQ71U36 451 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 P2RY8Q86VZ1 359 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 C11orf40Q8WZ69 217 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 NABP1Q96AH0 204 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 BOD1Q96IK1 185 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 RASSF4Q9H2L5 321 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 EMC7Q9NPA0 242 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 AASSQ9UDR5 926 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 NDRG3Q9UGV2 375 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 FLNCQ14315 2725 aa13.67□□□□□ -0.22
PCDHGC3-204ENST00000617222 FASNP49327 2511 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 HELZ2Q9BYK8 2649 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 SH3D21A4FU49 640 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 TVP23AA6NH52 213 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 H0YAE9 185 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 GLCEO94923 617 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 TFP02787 698 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 PPP3CBP16298 524 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 MSR1P21757 451 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 FMO3P31513 532 aa13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 RPS7P62081 194 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-204ENST00000617222 SNRPGP62308 76 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms