RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GLRX2Q9NS18 164 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 FOXD3Q9UJU5 478 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-212ENST00000613856 DIMT1Q9UNQ2 313 aaKnown RBP10.12□□□□□ -0.79
SLIRP-212ENST00000613856 PCDHGB1Q9Y5G3 927 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 CD8B2A6NJW9 211 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 OR6C65A6NJZ3 312 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 J3QRE1 110 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 DCTN6O00399 190 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CCL21O00585 134 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 ZNHIT1O43257 154 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 WDR1O75083 606 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 SLC43A1O75387 559 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 KHDRBS3O75525 346 aaKnown RBP10.11□□□□□ -0.79
SLIRP-212ENST00000613856 RAB36O95755 333 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 FADS2O95864 444 aaKnown RBP10.11□□□□□ -0.79
SLIRP-212ENST00000613856 IGHA1P01876 353 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 MT-ND2P03891 347 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 GYPBP06028 91 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 GABRA1P14867 456 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CTLA4P16410 223 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 DCKP27707 260 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CSNK1A1P48729 337 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 MVKQ03426 396 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 ST3GAL4Q11206 333 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CAMK2DQ13557 499 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 IRF3Q14653 427 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-212ENST00000613856 C10orf128Q5T292 105 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 NSUN5P2Q63ZY6 315 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 GFRALQ6UXV0 394 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CDH24Q86UP0 819 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 C20orf196Q8IYI0 205 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 STX19Q8N4C7 294 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 SVOPQ8N4V2 548 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 PROKR2Q8NFJ6 384 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 OR52I1Q8NGK6 324 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 WNT2BQ93097 391 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 TMEM80Q96HE8 168 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 TSSK2Q96PF2 358 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 RBP7Q96R05 134 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CNN2Q99439 309 aaKnown RBP10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CDCA4Q9BXL8 241 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 CALHM2Q9HA72 323 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 ADGRL4Q9HBW9 690 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 INPP5EQ9NRR6 644 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 GLTPQ9NZD2 209 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 B9D1Q9UPM9 204 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 SNX5Q9Y5X3 404 aa10.11□□□□□ -0.79
SLIRP-212ENST00000613856 PHF3Q92576 2039 aaKnown RBP10.11□□□□□ -0.79
SLIRP-212ENST00000613856 FIGNL2A6NMB9 653 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SLC16A7O60669 478 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SS18L1O75177 396 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 TGM6O95932 706 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 CLPTM1O96005 669 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 YES1P07947 543 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 HOXD4P09016 255 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SBK2P0C263 348 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 PYCR1P32322 319 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SELENOPP49908 381 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 ACTC1P68032 377 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 ACTA1P68133 377 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 GLO1Q04760 184 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 FMODQ06828 376 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 BLMHQ13867 455 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 GUSBP1Q15486 140 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 STK11Q15831 433 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 RIPPLY2Q5TAB7 128 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 TMEM154Q6P9G4 183 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SLC25A47Q6Q0C1 308 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 AAED1Q7RTV5 226 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 P4HA3Q7Z4N8 544 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SPARTQ8N0X7 666 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF808Q8N4W9 903 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SYT14Q8NB59 555 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 OR51G2Q8NGK0 314 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 OR6K6Q8NGW6 343 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 ZNRF4Q8WWF5 429 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 ZMYND19Q96E35 227 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 GMPPAQ96IJ6 420 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 LINC00470Q9BZP3 86 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 SRA1Q9HD15 236 aaKnown RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 PARPBPQ9NWS1 579 aa10.1□□□□□ -0.79
SLIRP-212ENST00000613856 NOSIPQ9Y314 301 aaKnown RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 EXOSC1Q9Y3B2 195 aaKnown RBP10.1□□□□□ -0.79
SLIRP-212ENST00000613856 FREM1Q5H8C1 2179 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 IGKV1D-43A0A0B4J1Z2 117 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MBD3L4A6NDZ8 208 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MBD3L3A6NE82 208 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MBD3L5A6NJ08 208 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 HRGP04196 525 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 ADRA2AP08913 450 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 GAAP10253 952 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 ATP6V1B1P15313 513 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 PCMT1P22061 227 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 C21orf33P30042 268 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 AGTR1P30556 359 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 NTF4P34130 210 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 CA7P43166 264 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms