RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PTP4A1	Q93096	173 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	RFK	Q969G6	155 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	NUAK2	Q9H093	628 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	OR51V1	Q9H2C8	321 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	B9D1	Q9UPM9	204 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	UNC79	Q9P2D8	2635 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZNF587B	E7ETH6	402 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	PRODH	O43272	600 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	DHH	O43323	396 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	SPI1	P17947	270 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	GABRB1	P18505	474 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	UGT2B10	P36537	528 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	CENPA	P49450	140 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZNF133	P52736	654 aa	Predicted RBP	19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	FOXG1	P55316	489 aa	Predicted RBP	19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	RPS7	P62081	194 aa	Known RBP	19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	TEK	Q02763	1124 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	FMOD	Q06828	376 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	SNTB1	Q13884	538 aa	Known RBP	19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	P2RY6	Q15077	328 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	TSC22D1	Q15714	1073 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	KLHL12	Q53G59	568 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	PHYHD1	Q5SRE7	291 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	SFRP5	Q5T4F7	317 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	LRFN4	Q6PJG9	635 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC25A47	Q6Q0C1	308 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	LINGO2	Q7L985	606 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZBTB46	Q86UZ6	589 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	ACBD4	Q8NC06	268 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	NMD3	Q96D46	503 aa	Known RBP	19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	TSSK2	Q96PF2	358 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	RACGAP1	Q9H0H5	632 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	GPR35	Q9HC97	309 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	DNAJC27	Q9NZQ0	273 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	MOK	Q9UQ07	419 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	NBPF19	A0A087WUL8	3843 aa		19.3	■□□□□ 0.68
LTBP4-227	ENST00000600026	C16orf97	H3BN30	126 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	LYZL6	O75951	148 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	ITGA5	P08648	1049 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	CTLA4	P16410	223 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	PSMB1	P20618	241 aa	Known RBP	19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	ROR2	Q01974	943 aa	Known RBP	19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	CDK5R2	Q13319	367 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	APOF	Q13790	326 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	STK11	Q15831	433 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC35D3	Q5M8T2	416 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	C10orf128	Q5T292	105 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	LCN1P1	Q5VSP4	162 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	AADACL4	Q5VUY2	407 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	OR6V1	Q8N148	313 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	CNIH3	Q8TBE1	160 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	NSMAF	Q92636	917 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZNF582	Q96NG8	517 aa	Predicted RBP	19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	HCAR1	Q9BXC0	346 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	CRLF2	Q9HC73	371 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	AASS	Q9UDR5	926 aa		19.29	■□□□□ 0.68
LTBP4-227	ENST00000600026	RPL36A-HNRNPH2	H7BZ11	118 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	ENTPD6	O75354	484 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	GYPB	P06028	91 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	COL8A1	P27658	744 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	GUCA1A	P43080	201 aa	Predicted RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	BLVRA	P53004	296 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	CDH11	P55287	796 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	C9orf135	Q5VTT2	229 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	MEX3B	Q6ZN04	569 aa	Known RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	MEPCE	Q7L2J0	689 aa	Known RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	BCDIN3D	Q7Z5W3	292 aa	Known RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	DMRTC2	Q8IXT2	367 aa	Predicted RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZNF433	Q8N7K0	673 aa	Predicted RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	BBS1	Q8NFJ9	593 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	FBLIM1	Q8WUP2	373 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	TAS2R16	Q9NYV7	291 aa		19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	19.28	■□□□□ 0.68	2e-6	■■■■□ 22.5
LTBP4-227	ENST00000600026	COA3	Q9Y2R0	106 aa	Predicted RBP	19.28	■□□□□ 0.68
LTBP4-227	ENST00000600026	SPTAN1	Q13813	2472 aa	Known RBP	19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	IGLV1-36	A0A0B4J1U3	117 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	SH3D21	A4FU49	640 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC22A31	A6NKX4	558 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	DCTN6	O00399	190 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	GLCE	O94923	617 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	CLU	P10909	449 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	IL32	P24001	234 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	MPG	P29372	298 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	PYCR1	P32322	319 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	GLO1	Q04760	184 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	TMED1	Q13445	227 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	CEACAM16	Q2WEN9	425 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	SP5	Q6BEB4	398 aa	Predicted RBP	19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	BHLHA15	Q7RTS1	189 aa	Predicted RBP	19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	OR6K6	Q8NGW6	343 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	APH1B	Q8WW43	257 aa		19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	KISS1R	Q969F8	398 aa	Predicted RBP	19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	WARS2	Q9UGM6	360 aa	Known RBP	19.27	■□□□□ 0.68
LTBP4-227	ENST00000600026	USP9Y	O00507	2555 aa	Predicted RBP	19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	IGKV1D-43	A0A0B4J1Z2	117 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026		A0A1W2PPL8	197 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	WBP4	O75554	376 aa	Known RBP	19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	RAD51D	O75771	328 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	HLA-DQA2	P01906	255 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	SLC2A5	P22732	501 aa		19.26	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms