RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TSTQ16762 297 aaKnown RBP17.46■□□□□ 0.39
TRIM47-207ENST00000593089 C10orf128Q5T292 105 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 METTL21CQ5VZV1 264 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 FAHD2BQ6P2I3 314 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-207ENST00000593089 CALHM3Q86XJ0 350 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 CPEB3Q8NE35 698 aaKnown RBP17.46■□□□□ 0.39
TRIM47-207ENST00000593089 NSMAFQ92636 917 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 HDAC2Q92769 488 aaKnown RBP17.46■□□□□ 0.39
TRIM47-207ENST00000593089 LRRC58Q96CX6 371 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 FAHD2AQ96GK7 314 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 SH3GL1Q99961 368 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 SIKE1Q9BRV8 207 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM120AQ9BXJ8 343 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 SIAEQ9HAT2 523 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 IGHV1-69-2A0A0G2JMI3 117 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 RGS9O75916 674 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF32P17041 273 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 STOMP27105 288 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 CRYBB2P43320 205 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF133P52736 654 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 MRPS34P82930 218 aaKnown RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 CD47Q08722 323 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 SGCAQ16586 387 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 ARMC4Q5T2S8 1044 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 MEX3DQ86XN8 651 aaKnown RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 OR8J3Q8NGG0 315 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 POLR2J2Q9GZM3 115 aaKnown RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 POLR2J3Q9H1A7 115 aaKnown RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF665Q9H7R5 613 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 NKIRAS2Q9NYR9 191 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 STX18Q9P2W9 335 aaKnown RBP17.45■□□□□ 0.38
TRIM47-207ENST00000593089 MED31Q9Y3C7 131 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 UGT2A1Q9Y4X1 527 aa17.45■□□□□ 0.38
TRIM47-207ENST00000593089 IGKV1D-43A0A0B4J1Z2 117 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 TRAV20A0A0B4J274 112 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 FXYD1O00168 92 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 MGRN1O60291 552 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 PIP5K1CO60331 668 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 MT-ND5P03915 603 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 TEKQ02763 1124 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 TOP3AQ13472 1001 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-207ENST00000593089 MOGQ16653 247 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 MMEL1Q495T6 779 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 SPATA46Q5T0L3 261 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 USP51Q70EK9 711 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 AKR7LQ8NHP1 331 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 LIPHQ8WWY8 451 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 NABP1Q96AH0 204 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 CACNG2Q9Y698 323 aa17.44■□□□□ 0.38
TRIM47-207ENST00000593089 MRASO14807 208 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 PNPP00491 289 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 IGF2P01344 180 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 IFNA14P01570 189 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 IGHV3-13P01766 116 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 TSPAN19P0C672 248 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ANPEPP15144 967 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 GCH1P30793 250 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ERVK-25P63136 954 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 LRRC23Q53EV4 343 aaPredicted RBP17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ALG10Q5BKT4 473 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ACSM5Q6NUN0 579 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ERICH5Q6P6B1 374 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 C12orf54Q6X4T0 127 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF101Q8IZC7 436 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 SEMA6DQ8NFY4 1073 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 NMD3Q96D46 503 aaKnown RBP17.43■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF583Q96ND8 569 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 TXNIPQ9H3M7 391 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 SAP30LQ9HAJ7 183 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 SMURF2Q9HAU4 748 aa17.43■□□□□ 0.38
TRIM47-207ENST00000593089 LOC100509620A0A075B734 347 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 A0A0A6YYJ9 748 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 C5orf49A4QMS7 147 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 CLDN25C9JDP6 229 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 SPRY3O43610 288 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 MPZL1O95297 269 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 MPV17P39210 176 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 WNT5AP41221 380 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 GDI2P50395 445 aaKnown RBP17.42■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF81P51508 661 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 SF3A3Q12874 501 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIM47-207ENST00000593089 SCGB2A2Q13296 93 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 HFEQ30201 348 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 ZNF718Q3SXZ3 478 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 CYBRD1Q53TN4 286 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 THEM4Q5T1C6 240 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 HDXQ7Z353 690 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 CLDN22Q8N7P3 220 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 C10orf82Q8WW14 230 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 IPCEF1Q8WWN9 437 aaPredicted RBP17.42■□□□□ 0.38
TRIM47-207ENST00000593089 RAB39BQ96DA2 213 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 TPD52L3Q96J77 140 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 POM121L2Q96KW2 1035 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 G6PC2Q9NQR9 355 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 EIF3KQ9UBQ5 218 aaKnown RBP17.42■□□□□ 0.38
TRIM47-207ENST00000593089 WIPI2Q9Y4P8 454 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 NBEAL1Q6ZS30 2694 aa17.42■□□□□ 0.38
TRIM47-207ENST00000593089 LOC105371242A0A075B767 164 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms