RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 GMPPBQ9Y5P6 360 aa8.47□□□□□ -1.05
DDX39A-220ENST00000593008 ANKHD1Q8IWZ3 2542 aaKnown RBP8.47□□□□□ -1.05
DDX39A-220ENST00000593008 A0A096LPE4 126 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 A0A1W2PPL8 197 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 A0A1W2PPZ6 126 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 A6NIZ1 184 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 RIIAD1A6NNX1 92 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 XKRYO14609 159 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 MSTNO14793 375 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 SLC16A6O15403 523 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 TLX2O43763 284 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 SLC16A7O60669 478 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ENTPD6O75354 484 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 RAD51DO75771 328 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ADRA2AP08913 450 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 PATE4P0C8F1 98 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 APEHP13798 732 aaKnown RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 SPI1P17947 270 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 GABRB1P18505 474 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 CAPGP40121 348 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 RAP1BP61224 184 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 RAP1AP62834 184 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ARF1P84077 181 aaKnown RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 EFNB1P98172 346 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 LINC01590Q5TEZ4 76 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF691Q5VV52 312 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 GPR139Q6DWJ6 353 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 KLHL24Q6TFL4 600 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 USP51Q70EK9 711 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 CXXC5Q7LFL8 322 aaKnown RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 SHFQ7M4L6 423 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 RFLNBQ8N5W9 214 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 FGFBP3Q8TAT2 258 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 FAM222BQ8WU58 562 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 TFAP2CQ92754 450 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 PTP4A1Q93096 173 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 KISS1RQ969F8 398 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ZMYND19Q96E35 227 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 HRASLS5Q96KN8 279 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ADAD1Q96M93 576 aaKnown RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 NDEL1Q9GZM8 345 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 OR51V1Q9H2C8 321 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 SRA1Q9HD15 236 aaKnown RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 MALT1Q9UDY8 824 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 COA3Q9Y2R0 106 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-220ENST00000593008 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
DDX39A-220ENST00000593008 A6NNC1 897 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 DHHO43323 396 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 AKAP8O43823 692 aaKnown RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SELENOFO60613 162 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 WBP4O75554 376 aaKnown RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 CTAG2O75638 210 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 TFP02787 698 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 MRPL3P09001 348 aaKnown RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 GAAP10253 952 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 CD8BP10966 210 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 EPXP11678 715 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF3P17036 446 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 COX5AP20674 150 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SLC2A5P22732 501 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 FMO3P31513 532 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 CENPAP49450 140 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SORDQ00796 357 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 IL5RAQ01344 420 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 MAD2L1BPQ15013 274 aaPredicted RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 KLHL12Q53G59 568 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 AADACL4Q5VUY2 407 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 FBXW9Q5XUX1 488 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ADCK1Q86TW2 530 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 GPR137CQ8N3F9 429 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 DHRSXQ8N5I4 330 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF555Q8NEP9 628 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 PROKR2Q8NFJ6 384 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 TMEM163Q8TC26 289 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SGCDQ92629 289 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 NABP1Q96AH0 204 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 LRR1Q96L50 414 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF582Q96NG8 517 aaPredicted RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SLC38A2Q96QD8 506 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SH3GL3Q99963 347 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 ALG12Q9BV10 488 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 TTTY10Q9BZA0 68 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 SEC61A2Q9H9S3 476 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 PLSCR4Q9NRQ2 329 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 PARPBPQ9NWS1 579 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 MRPL22Q9NWU5 206 aaKnown RBP8.45□□□□□ -1.06
DDX39A-220ENST00000593008 UPB1Q9UBR1 384 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 KLHL21Q9UJP4 597 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 B9D1Q9UPM9 204 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 BAIAP2Q9UQB8 552 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 KLHDC2Q9Y2U9 406 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 PRR14LQ5THK1 2151 aa8.45□□□□□ -1.06
DDX39A-220ENST00000593008 CCDC168Q8NDH2 2452 aa8.44□□□□□ -1.06
DDX39A-220ENST00000593008 PRR32B1ATL7 298 aa8.44□□□□□ -1.06
DDX39A-220ENST00000593008 ZNF587BE7ETH6 402 aa8.44□□□□□ -1.06
DDX39A-220ENST00000593008 KRT33AO76009 404 aa8.44□□□□□ -1.06
DDX39A-220ENST00000593008 RENP00797 406 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms