RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ALPK2Q86TB3 2170 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 TEX13CA0A0J9YWL9 993 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 DHRS12A0PJE2 317 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF503-AS2A6NEH8 195 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 AQP12BA6NM10 295 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 AHCYL1O43865 530 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 SLC16A7O60669 478 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 KHDRBS3O75525 346 aaKnown RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 PPP1R3DO95685 299 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 RENP00797 406 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CST1P01037 141 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CD8AP01732 235 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 SERPINA5P05154 406 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 ERCC1P07992 297 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 OR4A8P0C604 315 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 HOXB6P17509 224 aaKnown RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 FPR3P25089 353 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CALCRP30988 508 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 LIMS1P48059 325 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 PCBD1P61457 104 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 MRPS34P82930 218 aaKnown RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 SNTB2Q13425 540 aaKnown RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 FLOT2Q14254 428 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 TBC1D28Q2M2D7 210 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 RFX4Q33E94 735 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 NRN1LQ496H8 165 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 C10orf128Q5T292 105 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 OR2T5Q6IEZ7 315 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 DNM1P34Q6PK57 102 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 DTX2Q86UW9 622 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 AQP12AQ8IXF9 295 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 ALDH16A1Q8IZ83 802 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 SLC30A7Q8NEW0 376 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 OR2T29Q8NH02 315 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF519Q8TB69 540 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 SAMD8Q96LT4 415 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 VRK1Q99986 396 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CHID1Q9BWS9 393 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 OR52D1Q9H346 318 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 C1orf198Q9H425 327 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CA10Q9NS85 328 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 CMAHPQ9Y471 501 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 LYVE1Q9Y5Y7 322 aa8.74□□□□□ -1.01
BRCA1-227ENST00000591849 HRNRQ86YZ3 2850 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-227ENST00000591849 ABCA2Q9BZC7 2435 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 CADP27708 2225 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 SLC22A23A1A5C7 686 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 PRSS37A4D1T9 235 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 C12orf71A8MTZ7 269 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 B9A039 149 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 OVOL3O00110 214 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 ACOT8O14734 319 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 GSC2O15499 205 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 SSX4O60224 188 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 E2F6O75461 281 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 PAX1P15863 534 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF14P17017 642 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 CCNOP22674 350 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 NR4A1P22736 598 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 SDHAP31040 664 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 THBS4P35443 961 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF133P52736 654 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 HMGA2P52926 109 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 NUDT6P53370 316 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 SELENOVP59797 346 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 RPS23P62266 143 aaKnown RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 HGFACQ04756 655 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 BNIP1Q12981 228 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 TSPAN31Q12999 210 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 FHL1Q13642 323 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 CLEC12BQ2HXU8 276 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 FAM27BQ5VT28 67 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 RPL13AP3Q6NVV1 102 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 C1orf94Q6P1W5 598 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 PGBD2Q6P3X8 592 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 ADCK1Q86TW2 530 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 CLDN22Q8N7P3 220 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 AQP11Q8NBQ7 271 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 ICA1LQ8NDH6 482 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 NUP37Q8NFH4 326 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 OR9Q2Q8NGE9 314 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 FGFBP3Q8TAT2 258 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 RASD2Q96D21 266 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 GPA33Q99795 319 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 FUZQ9BT04 418 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 NOX3Q9HBY0 568 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 DYNLRB1Q9NP97 96 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 NRIP3Q9NQ35 241 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 EIF3KQ9UBQ5 218 aaKnown RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 FBXO9Q9UK97 447 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-227ENST00000591849 POLR1DQ9Y2S0 133 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 TIMM10BQ9Y5J6 103 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 U3KQV3 271 aa8.73□□□□□ -1.01
BRCA1-227ENST00000591849 DSCAMO60469 2012 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 IGKV1D-43A0A0B4J1Z2 117 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 H7C1Q1 480 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms