RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TSEN54Q7Z6J9 526 aaKnown RBP9.04□□□□□ -0.96
SDF2-208ENST00000589788 ZDHHC21Q8IVQ6 265 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 WDFY1Q8IWB7 410 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 OR13C2Q8NGS9 318 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 SLC7A13Q8TCU3 470 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 SMAP2Q8WU79 429 aaPredicted RBP9.04□□□□□ -0.96
SDF2-208ENST00000589788 ASB10Q8WXI3 467 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 TMEM54Q969K7 222 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 COX4I2Q96KJ9 171 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 SLC38A2Q96QD8 506 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 FOXB1Q99853 325 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 CHID1Q9BWS9 393 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 NELFAQ9H3P2 528 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 RNPEPL1Q9HAU8 725 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 CGGBP1Q9UFW8 167 aaPredicted RBP9.04□□□□□ -0.96
SDF2-208ENST00000589788 ATP23Q9Y6H3 246 aa9.04□□□□□ -0.96
SDF2-208ENST00000589788 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 ARID1AO14497 2285 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TRAV27A0A087WT01 109 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 IGHV1-18A0A0C4DH31 117 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 CENPBD1B2RD01 187 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TIPRLO75663 272 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 GADD45GO95257 159 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 CRYAAP02489 173 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 QDPRP09417 244 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TSPAN19P0C672 248 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 CD79AP11912 226 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 NR2C1P13056 603 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 ANPEPP15144 967 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 B4GALT1P15291 398 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 CBR1P16152 277 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 FASP25445 335 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 RPL4P36578 427 aaKnown RBP9.03□□□□□ -0.96
SDF2-208ENST00000589788 ZNF84P51523 738 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 CTXN1P60606 82 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 SPIBQ01892 262 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 C3orf36Q3SXR2 165 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 IQCCQ4KMZ1 466 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TMPRSS11FQ6ZWK6 438 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 FBXL14Q8N1E6 418 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 LRRC75A-AS1Q8N1F1 130 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 PQLC1Q8N2U9 271 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 SYT14Q8NB59 555 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 BVESQ8NE79 360 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 NOXO1Q8NFA2 376 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 PERPQ96FX8 193 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 RCC1LQ96I51 464 aaKnown RBP9.03□□□□□ -0.96
SDF2-208ENST00000589788 TNFRSF13CQ96RJ3 184 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 DHRS9Q9BPW9 319 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TXNIPQ9H3M7 391 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 GFOD1Q9NXC2 390 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 MOKQ9UQ07 419 aa9.03□□□□□ -0.96
SDF2-208ENST00000589788 TRBV4-1A0A0J9YWV2 114 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 A6NIZ1 184 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 NPIPB13A6NJU9 1138 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 NPIPB4C9JG80 1138 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ATP6V1G2-DDX39BF2Z307 99 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 DHHO43323 396 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 TRMUO75648 421 aaKnown RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 HLA-HP01893 362 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 SOD3P08294 240 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 CECR9P0C854 216 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 DANCRP0C864 163 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ARR3P36575 388 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ACVR1BP36896 505 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 PTH2RP49190 550 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 FABP6P51161 128 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 IDH3GP51553 393 aaPredicted RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 RAP1BP61224 184 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 RPL27P61353 136 aaKnown RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 RAP1AP62834 184 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ADAM8P78325 824 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 MYBPC1Q00872 1141 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 RUNX1T1Q06455 604 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 PIGFQ07326 219 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 CD47Q08722 323 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 NPRL3Q12980 569 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ATP6AP1Q15904 470 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ZBED5Q49AG3 693 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 AGAP6Q5VW22 663 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 SHEQ5VZ18 495 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 FAM205BPQ63HN1 556 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 ZNF627Q7L945 461 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 MDP1Q86V88 176 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 IGFN1Q86VF2 1251 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 TGIF2LYQ8IUE0 185 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 OR4K5Q8NGD3 323 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 LRTOMTQ8WZ04 291 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 TRMT61AQ96FX7 289 aaKnown RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 ZNF347Q96SE7 839 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 CRNNQ9UBG3 495 aaPredicted RBP9.02□□□□□ -0.97
SDF2-208ENST00000589788 DNAJB9Q9UBS3 223 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms