RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TMEM38BQ9NVV0 291 aa14.91□□□□□ -0.02
PRKCSH-203ENST00000586486 GALNT8Q9NY28 637 aa14.91□□□□□ -0.02
PRKCSH-203ENST00000586486 COA3Q9Y2R0 106 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-203ENST00000586486 FLNCQ14315 2725 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 CLEC18AA5D8T8 446 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 GLCEO94923 617 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 GYPBP06028 91 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 GAAP10253 952 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 MYF6P23409 242 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 LAP3P28838 519 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 PYCR1P32322 319 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 ARF1P84077 181 aaKnown RBP14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 LINC01590Q5TEZ4 76 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 CLEC18BQ6UXF7 455 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 STAC2Q6ZMT1 411 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 CLEC18CQ8NCF0 446 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 OR1K1Q8NGR3 316 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 APH1BQ8WW43 257 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 ZNRF4Q8WWF5 429 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 LRRC46Q96FV0 321 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 ZNF582Q96NG8 517 aaPredicted RBP14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 HDHD5Q9BXW7 423 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 Q9H521 79 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 RERGLQ9H628 205 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 RASSF1Q9NS23 344 aa14.9□□□□□ -0.02
PRKCSH-203ENST00000586486 SLC22A31A6NKX4 558 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 AGFG2O95081 481 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 HRGP04196 525 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 NPR2P20594 1047 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 TFF3Q07654 80 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 DBPQ10586 325 aaPredicted RBP14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 APOFQ13790 326 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 GABRA6Q16445 453 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 KCNMB1Q16558 191 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 C9orf135Q5VTT2 229 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 OR7E24Q6IFN5 339 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 ANKRD16Q6P6B7 361 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 MEPCEQ7L2J0 689 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 THAP5Q7Z6K1 395 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 C17orf78Q8N4C9 275 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 SLC26A10Q8NG04 563 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 RNASE6Q93091 150 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 KISS1RQ969F8 398 aaPredicted RBP14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 RFKQ969G6 155 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 NABP1Q96AH0 204 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 Q96MT0 163 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 OR10A4Q9H209 315 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 OR51V1Q9H2C8 321 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 NELFAQ9H3P2 528 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 POLE4Q9NR33 117 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 DNAJC27Q9NZQ0 273 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 CACNA1CQ13936 2221 aa14.89□□□□□ -0.03
PRKCSH-203ENST00000586486 A0A1W2PPL8 197 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 NKX2-6A6NCS4 301 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 CCDC182A6NF36 153 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 WBP4O75554 376 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 LYZL6O75951 148 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 B4GALT1P15291 398 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 HSF2Q03933 536 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 SRSF1Q07955 248 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 TMED1Q13445 227 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 KLHL12Q53G59 568 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 LCN1P1Q5VSP4 162 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 ZNF813Q6ZN06 617 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 BHLHA15Q7RTS1 189 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 BCDIN3DQ7Z5W3 292 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 OR51L1Q8NGJ5 315 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 USB1Q9BQ65 265 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 SIAEQ9HAT2 523 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 CLN6Q9NWW5 311 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 H2AFY2Q9P0M6 372 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 DOPEY1Q5JWR5 2465 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 SNTNA6NMZ2 147 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 DENRO43583 198 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 ENTPD6O75354 484 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 MSR1P21757 451 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 HTR1FP30939 366 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 FMO3P31513 532 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 CCKARP32238 428 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 CDAP32320 146 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 UGT2B10P36537 528 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 GUCA1AP43080 201 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 CDH11P55287 796 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 FAM27E3Q08E93 113 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 GGTLC2Q14390 218 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 C1QTNF12Q5T7M4 302 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 FAM27BQ5VT28 67 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 SLC22A24Q8N4F4 322 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 OR6K6Q8NGW6 343 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 BCL2L2Q92843 193 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 TEAD3Q99594 435 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 SEC61A2Q9H9S3 476 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 HAO2Q9NYQ3 351 aa14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 WARS2Q9UGM6 360 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRKCSH-203ENST00000586486 USP9XQ93008 2570 aaPredicted RBP14.87□□□□□ -0.03
PRKCSH-203ENST00000586486 HCFC1P51610 2035 aa14.87□□□□□ -0.03
PRKCSH-203ENST00000586486 CIB4A0PJX0 185 aa14.87□□□□□ -0.03
PRKCSH-203ENST00000586486 SH3D21A4FU49 640 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms