RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TRIM15Q9C019 465 aa23.52■■□□□ 1.36
SMARCD2-210ENST00000584400 NRIP3Q9NQ35 241 aa23.52■■□□□ 1.36
SMARCD2-210ENST00000584400 ITPR3Q14573 2671 aa23.52■■□□□ 1.36
SMARCD2-210ENST00000584400 CELSR1Q9NYQ6 3014 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 SLC22A23A1A5C7 686 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 FPR3P25089 353 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 SDHAP31040 664 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 THBS4P35443 961 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 DSCR9P59020 149 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 SGCAQ16586 387 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 MST1LQ2TV78 715 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 KRT80Q6KB66 452 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 SMARCD3Q6STE5 483 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 ZER1Q7Z7L7 766 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 FGFBP3Q8TAT2 258 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 Q96M85 177 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 THTPAQ9BU02 230 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 SLC7A8Q9UHI5 535 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 ADAM18Q9Y3Q7 739 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 CMAHPQ9Y471 501 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 UGT2A1Q9Y4X1 527 aa23.51■■□□□ 1.35
SMARCD2-210ENST00000584400 TCRBV5S2A0A599 114 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 GYG2O15488 501 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 SSX4O60224 188 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 NDUFS7O75251 213 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 MAGEA2P43356 314 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 PCBD1P61457 104 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 HSF2Q03933 536 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 TRAP1Q12931 704 aaKnown RBP23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 TBC1D28Q2M2D7 210 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 FAM27BQ5VT28 67 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 FAM122BQ7Z309 247 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 ADCK1Q86TW2 530 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 SLC30A7Q8NEW0 376 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 PLK3Q9H4B4 646 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 FKBP7Q9Y680 259 aa23.5■■□□□ 1.35
SMARCD2-210ENST00000584400 PRSS37A4D1T9 235 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 APEHP13798 732 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 ZNF26P17031 533 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 CDAP32320 146 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 GLRXP35754 106 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 EFNA4P52798 201 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 HMGA2P52926 109 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 MS4A2Q01362 244 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 KRR1Q13601 381 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 ZNF584Q8IVC4 421 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 CLDN22Q8N7P3 220 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 GNPDA2Q8TDQ7 276 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 HTRA1Q92743 480 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 NABP1Q96AH0 204 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 CCDC124Q96CT7 223 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 RHNO1Q9BSD3 238 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 WACQ9BTA9 647 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 CDH20Q9HBT6 801 aa23.49■■□□□ 1.35
SMARCD2-210ENST00000584400 IGKV1D-43A0A0B4J1Z2 117 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 TEX13CA0A0J9YWL9 993 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 A0A1W2PPL8 197 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 TNFRSF11BO00300 401 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 UBOX5O94941 541 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 ERCC1P07992 297 aaPredicted RBP23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 HOXB6P17509 224 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 SLC6A6P31641 620 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 TNK1Q13470 666 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 RFX4Q33E94 735 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 MESTQ5EB52 335 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 C1orf94Q6P1W5 598 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 CLEC2AQ6UVW9 174 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 FANK1Q8TC84 345 aa23.48■■□□□ 1.35
SMARCD2-210ENST00000584400 CST2P09228 141 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 MMP7P09237 267 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 CSF3P09919 207 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 APLNRP35414 380 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 PPOXP50336 477 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 FOXL2NBQ6ZUU3 175 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 ALDH16A1Q8IZ83 802 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 OR52D1Q9H346 318 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 IER3IP1Q9Y5U9 82 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 LYVE1Q9Y5Y7 322 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 ALPK2Q86TB3 2170 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 ARID1AO14497 2285 aa23.47■■□□□ 1.35
SMARCD2-210ENST00000584400 H7C1C5 153 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 IMPA2O14732 288 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 SMAD7O15105 426 aaKnown RBP23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 SNAP29O95721 258 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 TXNDC12O95881 172 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 F12P00748 615 aaPredicted RBP23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 MSR1P21757 451 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 EVX1P49640 407 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 RIPPLY3P57055 190 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 LCN6P62502 163 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 TSPAN31Q12999 210 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 RPL13AP3Q6NVV1 102 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 THSD4Q6ZMP0 1018 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 DNM1P46Q6ZS02 220 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 SYT9Q86SS6 491 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 CIARTQ8N365 385 aaPredicted RBP23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 RASD2Q96D21 266 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 CLPTM1LQ96KA5 538 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 GPA33Q99795 319 aa23.46■■□□□ 1.35
SMARCD2-210ENST00000584400 VRK1Q99986 396 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms