RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 AQP4P55087 323 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 KCNMB1Q16558 191 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 CEACAM16Q2WEN9 425 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ZIK1Q3SY52 487 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 PHYHD1Q5SRE7 291 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 CARD17Q5XLA6 110 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ANKRD16Q6P6B7 361 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 USP51Q70EK9 711 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 LUZP2Q86TE4 346 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 GLB1L2Q8IW92 636 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ACBD4Q8NC06 268 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 STEAP2Q8NFT2 490 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 FAM81AQ8TBF8 368 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 PTP4A1Q93096 173 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 KISS1RQ969F8 398 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 NUAK2Q9H093 628 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 NELFAQ9H3P2 528 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 HINT3Q9NQE9 182 aaKnown RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 TMEM38BQ9NVV0 291 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 GALNT8Q9NY28 637 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 TVP23BQ9NYZ1 205 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 KCNG2Q9UJ96 466 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 RAB26Q9ULW5 256 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ALPK2Q86TB3 2170 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 PCNX1Q96RV3 2341 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 ADGRG4Q8IZF6 3080 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 ARPC4-TTLL3A0A0A6YYG9 625 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 IGKV1D-43A0A0B4J1Z2 117 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SLC22A31A6NKX4 558 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 C16orf97H3BN30 126 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 PRKYO43930 277 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SLC16A7O60669 478 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SLC2A10O95528 541 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 IGHV3-9P01782 118 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SPI1P17947 270 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 IGFBP2P18065 325 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 GABRB1P18505 474 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SLC2A5P22732 501 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 UGT2B10P36537 528 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 GUCA1AP43080 201 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 LSM6P62312 80 aaKnown RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 FMODQ06828 376 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 LGALS3BPQ08380 585 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 GGTLC2Q14390 218 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 GABRA6Q16445 453 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 OCLNQ16625 522 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 TIMM23BQ5SRD1 257 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 FAM27BQ5VT28 67 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 AADACL4Q5VUY2 407 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 CXorf67Q86X51 503 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 OR6V1Q8N148 313 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 TCEANCQ8N8B7 351 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 OR1K1Q8NGR3 316 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 RHOXF1Q8NHV9 184 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 RFKQ969G6 155 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF184Q99676 751 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 ANKRD60Q9BZ19 345 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 MARCH7Q9H992 704 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SIAEQ9HAT2 523 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 SLC24A3Q9HC58 644 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 RPRD1BQ9NQG5 326 aaKnown RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 HAO2Q9NYQ3 351 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 B9D1Q9UPM9 204 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 UGT2A1Q9Y4X1 527 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 HCFC1P51610 2035 aa9.13□□□□□ -0.95
CCDC47-203ENST00000580986 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-203ENST00000580986 CACNA1CQ13936 2221 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 SH3D21A4FU49 640 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 OR5H1A6NKK0 313 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 FAM90A27PA6NNH2 459 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 H7C1C5 153 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 DCTN6O00399 190 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 TLX2O43763 284 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 GLCEO94923 617 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 FARS2O95363 451 aaKnown RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 OR8G3PP0DMU2 310 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 GAAP10253 952 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 LAP3P28838 519 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CCKARP32238 428 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 ISL1P61371 349 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 LCN6P62502 163 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 HSF2Q03933 536 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CDSNQ15517 529 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 PCK2Q16822 640 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 C3orf36Q3SXR2 165 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 TEX30Q5JUR7 227 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 LINC01590Q5TEZ4 76 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 LCN1P1Q5VSP4 162 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 PLBD1Q6P4A8 553 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 BHLHA15Q7RTS1 189 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms