RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 SLC16A7O60669 478 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 CYTIPO60759 359 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 INMTO95050 263 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 VAMP5O95183 116 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 TFP02787 698 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 SBK2P0C263 348 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 JUNBP17275 347 aaPredicted RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 ATP6V1E1P36543 226 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 CD79BP40259 229 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 ETV1P50549 477 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 GP2P55259 537 aaKnown RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 CLRN1P58418 232 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 TMED1Q13445 227 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 RAB39AQ14964 217 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 ETFDHQ16134 617 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 OTPQ5XKR4 325 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 RFLNBQ8N5W9 214 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 ZIC4Q8N9L1 334 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 Q8NA96 180 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 FNDC9Q8TBE3 224 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 RNF128Q8TEB7 428 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 SLC25A44Q96H78 314 aaPredicted RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 COX4I2Q96KJ9 171 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 CNN2Q99439 309 aaKnown RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 TUBA1CQ9BQE3 449 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 SF3B5Q9BWJ5 86 aaKnown RBP8.87□□□□□ -0.99
GDE1-205ENST00000569899 CDCA4Q9BXL8 241 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 TTTY10Q9BZA0 68 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 TIGARQ9NQ88 270 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 HAO2Q9NYQ3 351 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 FLVCR1Q9Y5Y0 555 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 FKBP7Q9Y680 259 aa8.87□□□□□ -0.99
GDE1-205ENST00000569899 FREM1Q5H8C1 2179 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 A0A1B0GVC2 190 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 TVP23AA6NH52 213 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 C12orf71A8MTZ7 269 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 J3QRE1 110 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 AQP7O14520 342 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 AQP8O94778 261 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 SYNGR4O95473 234 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 IGHG1P01857 330 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 LIMS3P0CW19 117 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 LIMS4P0CW20 117 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 PSKH1P11801 424 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 CPN1P15169 458 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 MYL12AP19105 171 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 DCKP27707 260 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 PSMB9P28065 219 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 SELENOPP49908 381 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 RASGEF1BQ0VAM2 473 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 NKPD1Q17RQ9 610 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 FOXB2Q5VYV0 432 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 RPUSD3Q6P087 351 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 HDDC2Q7Z4H3 204 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 ZBTB46Q86UZ6 589 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 TMEM123Q8N131 208 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 POMGNT2Q8NAT1 580 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 OR10H4Q8NGA5 316 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 OR6X1Q8NH79 312 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 NMD3Q96D46 503 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 Q96M66 194 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 OR2M2Q96R28 347 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 OR5M11Q96RB7 305 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 MRPL13Q9BYD1 178 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 PRDM14Q9GZV8 571 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 RACGAP1Q9H0H5 632 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 ING1Q9UK53 422 aaPredicted RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 MCTS1Q9ULC4 181 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 B9D1Q9UPM9 204 aa8.86□□□□□ -0.99
GDE1-205ENST00000569899 LSM2Q9Y333 95 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 EXOSC1Q9Y3B2 195 aaKnown RBP8.86□□□□□ -0.99
GDE1-205ENST00000569899 A0A1B0GTH9 108 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ZNF726A6NNF4 738 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ZNF99A8MXY4 864 aaPredicted RBP8.85□□□□□ -0.99
GDE1-205ENST00000569899 MYL12BO14950 172 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ZNF432O94892 652 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 RPS27P42677 84 aaKnown RBP8.85□□□□□ -0.99
GDE1-205ENST00000569899 CENPAP49450 140 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 HCCSP53701 268 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 PHYHD1Q5SRE7 291 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 OR2G6Q5TZ20 316 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 UBE2UQ5VVX9 321 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 FAM180AQ6UWF9 173 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 SSX6Q7RTT6 188 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 GPR141Q7Z602 305 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.85□□□□□ -0.99
GDE1-205ENST00000569899 LHFPL3Q86UP9 236 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ERI1Q8IV48 349 aaKnown RBP8.85□□□□□ -0.99
GDE1-205ENST00000569899 SLC35F2Q8IXU6 374 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 TIGD4Q8IY51 512 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 MFSD4AQ8N468 514 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 NSMAFQ92636 917 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 RORBQ92753 470 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 PNPLA2Q96AD5 504 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 ADAD1Q96M93 576 aaKnown RBP8.85□□□□□ -0.99
GDE1-205ENST00000569899 ZNF649Q9BS31 505 aa8.85□□□□□ -0.99
GDE1-205ENST00000569899 MND1Q9BWT6 205 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms