RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CLEC4A	Q9UMR7	237 aa		1.38	□□□□□ -2.19
UBR1-209	ENST00000569243	EIF4G1	Q04637	1599 aa	Known RBP	1.38	□□□□□ -2.19
UBR1-209	ENST00000569243	CENPJ	Q9HC77	1338 aa	Predicted RBP	1.38	□□□□□ -2.19
UBR1-209	ENST00000569243	SDK2	Q58EX2	2172 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	GPATCH8	Q9UKJ3	1502 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	DOCK8	Q8NF50	2099 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243		A0A0B4J2A0	478 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	IGKV1D-13	A0A0B4J2D9	117 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	GOLGA6L7	A0A1B0GV03	622 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	FAM47DP	A6NHR8	397 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	XPO1	O14980	1071 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ANGPT2	O15123	496 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	RAD51B	O15315	384 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	POLR2D	O15514	142 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	MED7	O43513	233 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CDRT1	O95170	752 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SERPINA3	P01011	423 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	FGF4	P08620	206 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	TPM1	P09493	284 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	IQCF3	P0C7M6	154 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	IGKV1-13	P0DP09	117 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	PRPS2	P11908	318 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CCDC130	P13994	396 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	GAL	P22466	123 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	COL8A2	P25067	703 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	GNA11	P29992	359 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CHI3L1	P36222	383 aa	Predicted RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	YAP1	P46937	504 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CD151	P48509	253 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	RGS4	P49798	205 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ETV1	P50549	477 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	UGT2B15	P54855	530 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	AIF1	P55008	147 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ARG2	P78540	354 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	RCN1	Q15293	331 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	HADH	Q16836	314 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	KLHL38	Q2WGJ6	581 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SLC36A3	Q495N2	470 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CFAP157	Q5JU67	520 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	C10orf120	Q5SQS8	335 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ZNF493	Q6ZR52	646 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CENPQ	Q7L2Z9	268 aa	Predicted RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	TMEM135	Q86UB9	458 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CDR2L	Q86X02	465 aa	Predicted RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	NUDCD3	Q8IVD9	361 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	BBS5	Q8N3I7	341 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ANKFN1	Q8N957	763 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	BBOF1	Q8ND07	529 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	TRPV1	Q8NER1	839 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	OR13C2	Q8NGS9	318 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	OR4S2	Q8NH73	311 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	PEX13	Q92968	403 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	KIAA1143	Q96AT1	154 aa	Predicted RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CXorf40B	Q96DE9	158 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	L3HYPDH	Q96EM0	354 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SENP8	Q96LD8	212 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SULT4A1	Q9BR01	284 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CCDC77	Q9BR77	488 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SLC39A3	Q9BRY0	314 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	MRPL37	Q9BZE1	423 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	VCX2	Q9H322	139 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	CLSTN2	Q9H4D0	955 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	UBE2Z	Q9H832	354 aa	Predicted RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	METTL7A	Q9H8H3	244 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ZNHIT6	Q9NWK9	470 aa	Known RBP	1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	UBAP1	Q9NZ09	502 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	RNF14	Q9UBS8	474 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SUN2	Q9UH99	717 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	SHPK	Q9UHJ6	478 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	ZNF229	Q9UJW7	825 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	PSME2	Q9UL46	239 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	YEATS2	Q9ULM3	1422 aa		1.37	□□□□□ -2.19
UBR1-209	ENST00000569243	RPAP1	Q9BWH6	1393 aa	Predicted RBP	1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	GOLGA8O	A6NCC3	632 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	GOLGA8N	F8WBI6	632 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243		K7EQM0	130 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CACNG3	O60359	315 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	NEMF	O60524	1076 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	TBX19	O60806	448 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CBR3	O75828	277 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CCNK	O75909	580 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	FLOT1	O75955	427 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	SCGN	O76038	276 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	DIRAS1	O95057	198 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	NPPA	P01160	153 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	UGT2B4	P06133	528 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	UQCRFS1P1	P0C7P4	283 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	C1GALT1C1L	P0DN25	315 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	ANXA8	P13928	327 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	RPA2	P15927	270 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	FDFT1	P37268	417 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	ANP32A	P39687	249 aa	Known RBP	1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CCT6A	P40227	531 aa	Known RBP	1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CX3CR1	P49238	355 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	DUSP3	P51452	185 aa	Predicted RBP	1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CARD18	P57730	90 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	ACTR3	P61158	418 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	LIPE	Q05469	1076 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	CDC20	Q12834	499 aa		1.36	□□□□□ -2.19
UBR1-209	ENST00000569243	SRSF5	Q13243	272 aa	Known RBP	1.36	□□□□□ -2.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms