RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 V9GYQ6 96 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 IGHV4-61A0A0C4DH41 118 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 LOC390937A0A1W2PQ73 354 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 KIAA1324LA8MWY0 1029 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 DIRAS1O95057 198 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ERCC1P07992 297 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 IGHV4-31P0DP07 118 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 NR2C1P13056 603 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 DAOP14920 347 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ZNF16P17020 682 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ZNF26P17031 533 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ALDH3B1P43353 468 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC9A3P48764 834 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ERVK-25P63136 954 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 SGCAQ16586 387 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 TBC1D28Q2M2D7 210 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 FGD3Q5JSP0 725 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM205BPQ63HN1 556 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 PODNL1Q6PEZ8 512 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 NEU4Q8WWR8 484 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM46AQ96IP4 442 aaKnown RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 BPESC1Q9GZL8 116 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ANKRD19PQ9H560 264 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 SAMD4AQ9UPU9 718 aaKnown RBP17.17■□□□□ 0.34
SHCBP1-203ENST00000564272 A8MV72 311 aaPredicted RBP17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 H7C1C5 153 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 M0R233 179 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 SYNGR3O43761 229 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 STAMBPO95630 424 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 H1F0P07305 194 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 APEX1P27695 318 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 EVX1P49640 407 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 ERVS71-1P61550 626 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 LCN6P62502 163 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 HSF2Q03933 536 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 PLP2Q04941 152 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 ANKDD1AQ495B1 522 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 PABPC1L2AQ5JQF8 200 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 TMPRSS11FQ6ZWK6 438 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 CPEB3Q8NE35 698 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 C7orf34Q96L11 122 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 C1orf198Q9H425 327 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 CCNB1IP1Q9NPC3 277 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 REV1Q9UBZ9 1251 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 ARL2BPQ9Y2Y0 163 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 ADAM18Q9Y3Q7 739 aa17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM32AQ9Y421 112 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-203ENST00000564272 TRBV4-1A0A0J9YWV2 114 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 IQCMA0A1B0GVH7 501 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 A0A1W2PRQ8 180 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 A6NIZ1 184 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 MGRN1O60291 552 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 GMNNO75496 209 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 ZNF32P17041 273 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RPL4P36578 427 aaKnown RBP17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RAP1BP61224 184 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RAP1AP62834 184 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 DGCR6Q14129 220 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 ZBED5Q49AG3 693 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 IQCCQ4KMZ1 466 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 THEM4Q5T1C6 240 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RGS7BPQ6MZT1 257 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RRM2BQ7LG56 351 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 PIGWQ7Z7B1 504 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 PGAM4Q8N0Y7 254 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 RBP7Q96R05 134 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 KCNN2Q9H2S1 579 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 DUSP13Q9UII6 198 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 TMEM5Q9Y2B1 443 aa17.15■□□□□ 0.34
SHCBP1-203ENST00000564272 A0A1W2PPL8 197 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 A0A1W2PPW3 197 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 LYNX1G3V0Z9 82 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 SNAP29O95721 258 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 PTHP01270 115 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 LYNX1P0DP58 116 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 HSD17B1P14061 328 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 RHCEP18577 417 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 APLNRP35414 380 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 MSX2P35548 267 aaPredicted RBP17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 LIMS1P48059 325 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 SEC23BQ15437 767 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 ALKBH6Q3KRA9 238 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 CYB5R2Q6BCY4 276 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 ARIH2OSQ8N7S6 290 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 ICA1LQ8NDH6 482 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 OR1J2Q8NGS2 313 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 OR52J3Q8NH60 311 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 AKR7LQ8NHP1 331 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 UBASH3BQ8TF42 649 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 Q96M85 177 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 LRRC37BQ96QE4 947 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 GORASP2Q9H8Y8 452 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 MAGEL2Q9UJ55 1249 aa17.14■□□□□ 0.33
SHCBP1-203ENST00000564272 SLC22A23A1A5C7 686 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 CLPTM1O96005 669 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 SEMG1P04279 462 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 LCKP06239 509 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 CD14P08571 375 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms