RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
TPM1-209ENST00000558072 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
TPM1-209ENST00000558072 IGLV1-36A0A0B4J1U3 117 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 H7C1C5 153 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 MSTNO14793 375 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 RGS10O43665 173 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 CTLA4P16410 223 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 MSR1P21757 451 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 KIR2DL2P43627 348 aaPredicted RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 SLC15A1P46059 708 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 LCN6P62502 163 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 MRPS34P82930 218 aaKnown RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 ROR2Q01974 943 aaKnown RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 MVKQ03426 396 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 RUNX1T1Q06455 604 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 PMPCAQ10713 525 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 KCNMB1Q16558 191 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 OR7E24Q6IFN5 339 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 Q6ZT83 130 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 FOXL2NBQ6ZUU3 175 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 PRSS48Q7RTY5 328 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 SYT9Q86SS6 491 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 OR2AJ1Q8NGZ0 328 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 ASB5Q8WWX0 329 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 ASB17Q8WXJ9 295 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 ZNF775Q96BV0 537 aaPredicted RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 MARCH7Q9H992 704 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 SIAEQ9HAT2 523 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 CRLF2Q9HC73 371 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 GPR35Q9HC97 309 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 FGF20Q9NP95 211 aaPredicted RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 CLEC4AQ9UMR7 237 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 DIMT1Q9UNQ2 313 aaKnown RBP10.96□□□□□ -0.65
TPM1-209ENST00000558072 ERGIC3Q9Y282 383 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 MEMO1Q9Y316 297 aa10.96□□□□□ -0.65
TPM1-209ENST00000558072 ZFYVE26Q68DK2 2539 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 C12orf71A8MTZ7 269 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 PTGES3LE9PB15 166 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ZNF670-ZNF695F2Z2N8 137 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 M0R129 80 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 SBK2P0C263 348 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 OR8G3PP0DMU2 310 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 GNLYP22749 145 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ENTPD1P49961 510 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ACTA2P62736 377 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ACTG2P63267 376 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 TUBA4AP68366 448 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 SIRPAP78324 504 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 SLC35A2P78381 396 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ST3GAL4Q11206 333 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 MRPL28Q13084 256 aaKnown RBP10.95□□□□□ -0.66
TPM1-209ENST00000558072 TSPO2Q5TGU0 170 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
TPM1-209ENST00000558072 LRFN4Q6PJG9 635 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 TFAP2EQ6VUC0 442 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 TMPRSS11AQ6ZMR5 421 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 RHOUQ7L0Q8 258 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ZNF627Q7L945 461 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 NUFIP2Q7Z417 695 aaKnown RBP10.95□□□□□ -0.66
TPM1-209ENST00000558072 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 MRGPRGQ86SM5 289 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 GCNT2Q8N0V5 402 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 NSMAFQ92636 917 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 FCGR1BQ92637 280 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 GGHQ92820 318 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 FOXB1Q99853 325 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 C12orf49Q9H741 205 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 MED20Q9H944 212 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 WDR76Q9H967 626 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 FKBP14Q9NWM8 211 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ELOVL5Q9NYP7 299 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 TAS2R16Q9NYV7 291 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 OSGIN2Q9Y236 505 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 COA3Q9Y2R0 106 aaPredicted RBP10.95□□□□□ -0.66
TPM1-209ENST00000558072 POLR1DQ9Y2S0 133 aa10.95□□□□□ -0.66
TPM1-209ENST00000558072 ZGRF1Q86YA3 2104 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 A0A1W2PPL8 197 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 CCDC182A6NF36 153 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 CCL21O00585 134 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 XPNPEP2O43895 674 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 UPK3AO75631 287 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 TNFSF13O75888 250 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 GYPBP06028 91 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 CDK1P06493 297 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 LYNP07948 512 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 TACSTD2P09758 323 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 HOXC12P31275 282 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 PYCR1P32322 319 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 NUDT6P53370 316 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ADAM8P78325 824 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SMN1Q16637 294 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms