RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 CCDC124Q96CT7 223 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 NMD3Q96D46 503 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TMUB1Q9BVT8 246 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 CHID1Q9BWS9 393 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TEX12Q9BXU0 123 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 BCL2L14Q9BZR8 327 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 SEC61A2Q9H9S3 476 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 CDH20Q9HBT6 801 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 MYOZ1Q9NP98 299 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TUBG2Q9NRH3 451 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 EIF3KQ9UBQ5 218 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 SLC7A8Q9UHI5 535 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 BAIAP2Q9UQB8 552 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 SAMHD1Q9Y3Z3 626 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 CMAHPQ9Y471 501 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 IER3IP1Q9Y5U9 82 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ABCA4P78363 2273 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 IGHV2OR16-5A0A0B4J2B6 119 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 DHRS12A0PJE2 317 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ARRDC5A6NEK1 342 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ERICH4A6NGS2 130 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 GSC2O15499 205 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SEC14L2O76054 403 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SNAP29O95721 258 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 CST1P01037 141 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 CD8AP01732 235 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 MT-ND5P03915 603 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 OR4A8P0C604 315 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF35P13682 527 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ATP6V1B2P21281 511 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 MSR1P21757 451 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 LAP3P28838 519 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 PCSK6P29122 969 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 GLRXP35754 106 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 GSSP48637 474 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 EFNA4P52798 201 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 LSM6P62312 80 aaKnown RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 TUBA1BP68363 451 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 TUBA4AP68366 448 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 LSM11P83369 360 aaKnown RBP eCLIP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 MYBPC1Q00872 1141 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SCRN3Q0VDG4 424 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 KRR1Q13601 381 aaKnown RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 FHL1Q13642 323 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 RAB39AQ14964 217 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SEC23BQ15437 767 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SLC36A3Q495N2 470 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 RASSF6Q6ZTQ3 369 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 TUBA1AQ71U36 451 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 FAM122BQ7Z309 247 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 IGFN1Q86VF2 1251 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 JAZF1Q86VZ6 243 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SPATA24Q86W54 205 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 LRRC18Q8N456 261 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 CLDN22Q8N7P3 220 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SLC30A7Q8NEW0 376 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 C11orf40Q8WZ69 217 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 NSMAFQ92636 917 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 NEUROG1Q92886 237 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SLC7A6OSQ96CW6 309 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 C18orf12Q96KH6 178 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 Q96M85 177 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 COG8Q96MW5 612 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF75AQ96N20 296 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ERMAPQ96PL5 475 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 TSPAN32Q96QS1 320 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 SH3GL3Q99963 347 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 RHNO1Q9BSD3 238 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 IFT27Q9BW83 186 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 CACNG6Q9BXT2 260 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 RAB1BQ9H0U4 201 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 OR52D1Q9H346 318 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 MS4A5Q9H3V2 200 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF556Q9HAH1 456 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 IL20Q9NYY1 176 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 VSX1Q9NZR4 365 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 NDRG4Q9ULP0 352 aaKnown RBP6.81□□□□□ -1.32
PSEN1-222ENST00000557356 LYVE1Q9Y5Y7 322 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 FKBP7Q9Y680 259 aa6.81□□□□□ -1.32
PSEN1-222ENST00000557356 TEX13CA0A0J9YWL9 993 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 A0A1W2PPL8 197 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 SOCS2O14508 198 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 SLC16A7O60669 478 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 E2F6O75461 281 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 SLC2A10O95528 541 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 F12P00748 615 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-222ENST00000557356 COX5BP10606 129 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 ANXA8P13928 327 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 STOMP27105 288 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 CENPAP49450 140 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 PPOXP50336 477 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 GDI2P50395 445 aaKnown RBP6.8□□□□□ -1.32
PSEN1-222ENST00000557356 BLVRAP53004 296 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 NUDT6P53370 316 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 HGFACQ04756 655 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 GLO1Q04760 184 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 SPOCK1Q08629 439 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 ADIPOQQ15848 244 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 SWI5Q1ZZU3 235 aa6.8□□□□□ -1.32
PSEN1-222ENST00000557356 CLEC12BQ2HXU8 276 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms