RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 THRBP10828 461 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 ANPEPP15144 967 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 OR1E2P47887 323 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 CCL8P80075 99 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 TEKQ02763 1124 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 HSF2Q03933 536 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 COQ5Q5HYK3 327 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 PABPC1L2AQ5JQF8 200 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 CPEB3Q8NE35 698 aaKnown RBP13.57□□□□□ -0.24
TUBB3-213ENST00000557262 MOSPD2Q8NHP6 518 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 SMURF2Q9HAU4 748 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 GRIP1Q9Y3R0 1128 aa13.57□□□□□ -0.24
TUBB3-213ENST00000557262 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 NPIPB13A6NJU9 1138 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 NPIPB4C9JG80 1138 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 HAX1O00165 279 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 FXYD1O00168 92 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 MRASO14807 208 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 CDC14BO60729 498 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 MT-ND5P03915 603 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 ITGA2P17301 1181 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 DRD4P21917 467 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 CCNOP22674 350 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 STOMP27105 288 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 CDAP32320 146 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 CRYBB2P43320 205 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 KLF10Q13118 480 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 TAF11Q15544 211 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 SGCAQ16586 387 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 ICA1LQ8NDH6 482 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 OR51F2Q8NH61 342 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 HDAC2Q92769 488 aaKnown RBP13.56□□□□□ -0.24
TUBB3-213ENST00000557262 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
TUBB3-213ENST00000557262 LRRC37BQ96QE4 947 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 TXNIPQ9H3M7 391 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 METTL17Q9H7H0 456 aaPredicted RBP13.56□□□□□ -0.24
TUBB3-213ENST00000557262 LPAR2Q9HBW0 351 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 DECR2Q9NUI1 292 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 EIF3KQ9UBQ5 218 aaKnown RBP13.56□□□□□ -0.24
TUBB3-213ENST00000557262 UGT2A1Q9Y4X1 527 aa13.56□□□□□ -0.24
TUBB3-213ENST00000557262 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 IGHV1-69-2A0A0G2JMI3 117 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 LOC100653049A0A140TA62 436 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 BBIP1A8MTZ0 92 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 KRT34O76011 436 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 SLC2A10O95528 541 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 NR2C1P13056 603 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF32P17041 273 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 KDELR2P33947 212 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 ST3GAL3Q11203 375 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 MAPRE2Q15555 327 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF718Q3SXZ3 478 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 CYBRD1Q53TN4 286 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 FAM27BQ5VT28 67 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 NSMAFQ92636 917 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 NABP1Q96AH0 204 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 RBP7Q96R05 134 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 GID8Q9NWU2 228 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 NBEAL1Q6ZS30 2694 aa13.55□□□□□ -0.24
TUBB3-213ENST00000557262 IGKV1D-43A0A0B4J1Z2 117 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 TRAV20A0A0B4J274 112 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 TPD52L2O43399 206 aaKnown RBP13.54□□□□□ -0.24
TUBB3-213ENST00000557262 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.24
TUBB3-213ENST00000557262 GCH1P30793 250 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 IFNA8P32881 189 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 ARFIP2P53365 341 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 SELENOWP63302 87 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 PSG4Q00888 419 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 MVKQ03426 396 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 CD47Q08722 323 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 SCGB2A2Q13296 93 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 THEM4Q5T1C6 240 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 ACSM5Q6NUN0 579 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 FAHD2BQ6P2I3 314 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-213ENST00000557262 SLC25A47Q6Q0C1 308 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 UNQ6126/PRO20091Q6UXV3 157 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 C1orf174Q8IYL3 243 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 PCYOX1LQ8NBM8 494 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 FAHD2AQ96GK7 314 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 TPD52L3Q96J77 140 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 SAR1AQ9NR31 198 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-213ENST00000557262 HIF3AQ9Y2N7 669 aa13.54□□□□□ -0.24
TUBB3-213ENST00000557262 LOC100509620A0A075B734 347 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 FAM220BPB1ANY3 271 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 IFI30P13284 250 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 GUCA1AP43080 201 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 GDI2P50395 445 aaKnown RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF81P51508 661 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms