RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ANKRD16Q6P6B7 361 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ZNF474Q6S9Z5 364 aaPredicted RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 MEPCEQ7L2J0 689 aaKnown RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 LINGO2Q7L985 606 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 EGFL6Q8IUX8 553 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 LIX1LQ8IVB5 337 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 CPOQ8IVL8 374 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ZNF433Q8N7K0 673 aaPredicted RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ZNF610Q8N9Z0 462 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 SYT14Q8NB59 555 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 SLC26A10Q8NG04 563 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ITLN2Q8WWU7 325 aaPredicted RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ZNF775Q96BV0 537 aaPredicted RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 ALKBH3Q96Q83 286 aaPredicted RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 MNTQ99583 582 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 FOXB1Q99853 325 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 NELFAQ9H3P2 528 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 C12orf49Q9H741 205 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 SIAEQ9HAT2 523 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 RPRD1BQ9NQG5 326 aaKnown RBP9.91□□□□□ -0.82
FOXN3-212ENST00000556541 TMEM38BQ9NVV0 291 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 CLN6Q9NWW5 311 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 PRSS50Q9UI38 385 aa9.91□□□□□ -0.82
FOXN3-212ENST00000556541 UBR5O95071 2799 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 ARPC4-TTLL3A0A0A6YYG9 625 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 IGKV1D-43A0A0B4J1Z2 117 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 CCDC182A6NF36 153 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 DCTN6O00399 190 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 WBP4O75554 376 aaKnown RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 KRT33AO76009 404 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 GNAO1P09471 354 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 PPP3CBP16298 524 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 BMP5P22003 454 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 IGHV1-2P23083 117 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 FMO3P31513 532 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 CD79BP40259 229 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 GUCA1AP43080 201 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 HSF2Q03933 536 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 FAPQ12884 760 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 SFRP5Q5T4F7 317 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 C6orf52Q5T4I8 152 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 CARD17Q5XLA6 110 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 PLBD1Q6P4A8 553 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 RHOUQ7L0Q8 258 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 FAM169BQ8N8A8 192 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 CYB561A3Q8NBI2 242 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 STEAP2Q8NFT2 490 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 OR1K1Q8NGR3 316 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 RNASE6Q93091 150 aaKnown RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 KISS1RQ969F8 398 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 NABP1Q96AH0 204 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 ZNF582Q96NG8 517 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 IL4I1Q96RQ9 567 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 TEAD3Q99594 435 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 HCAR1Q9BXC0 346 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 OPN3Q9H1Y3 402 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 POLE4Q9NR33 117 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 H2AFY2Q9P0M6 372 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-212ENST00000556541 HECTD1Q9ULT8 2610 aa9.9□□□□□ -0.82
FOXN3-212ENST00000556541 UNC79Q9P2D8 2635 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 IRGMA1A4Y4 181 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 FAM183AA6NL82 134 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 H7C1C5 153 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 J3QKU1 62 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 SMNDC1O75940 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 FARS2O95363 451 aaKnown RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CLDN14O95500 239 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CST2P09228 141 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CCDC159P0C7I6 412 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 OR8G3PP0DMU2 310 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 PIPP12273 146 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 MSR1P21757 451 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 SLC15A1P46059 708 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CDH11P55287 796 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 LCN6P62502 163 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 IL5RAQ01344 420 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 FMODQ06828 376 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 TFF3Q07654 80 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CDK5R2Q13319 367 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 GABRA6Q16445 453 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 C3orf36Q3SXR2 165 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 STAC2Q6ZMT1 411 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 UBE2J2Q8N2K1 259 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 PROKR2Q8NFJ6 384 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CA5BP1Q8WTZ4 195 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 BCL2L2Q92843 193 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 RBM24Q9BX46 236 aaKnown RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 JAM3Q9BX67 310 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 YTHDF1Q9BYJ9 559 aaKnown RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 KCNJ16Q9NPI9 418 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 CNOT2Q9NZN8 540 aaKnown RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 ATPIF1Q9UII2 106 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 FBXL3Q9UKT7 428 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 COA3Q9Y2R0 106 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 RPL36Q9Y3U8 105 aaKnown RBP9.89□□□□□ -0.83
FOXN3-212ENST00000556541 PCDHGB1Q9Y5G3 927 aa9.89□□□□□ -0.83
FOXN3-212ENST00000556541 DOPEY1Q5JWR5 2465 aa9.88□□□□□ -0.83
FOXN3-212ENST00000556541 EEF1E1-BLOC1S5C9J1V9 151 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms