RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC2A10O95528 541 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 TSPAN19P0C672 248 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 PCMT1P22061 227 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 CDAP32320 146 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 APLNRP35414 380 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 TMEM154Q6P9G4 183 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 SNX33Q8WV41 574 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 HDAC2Q92769 488 aaKnown RBP19.33■□□□□ 0.68
ACTN1-220ENST00000556433 ZNF416Q9BWM5 594 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 RACGAP1Q9H0H5 632 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 CCNB1IP1Q9NPC3 277 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 SLCO1C1Q9NYB5 712 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 TREM2Q9NZC2 230 aa19.33■□□□□ 0.68
ACTN1-220ENST00000556433 FAM220BPB1ANY3 271 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 WNT9BO14905 357 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 CCNOP22674 350 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 MRPS34P82930 218 aaKnown RBP19.32■□□□□ 0.68
ACTN1-220ENST00000556433 SGCAQ16586 387 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 PABPC1L2AQ5JQF8 200 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 GLCCI1Q86VQ1 547 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 CPEB3Q8NE35 698 aaKnown RBP19.32■□□□□ 0.68
ACTN1-220ENST00000556433 OR2T12Q8NG77 320 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 NSMAFQ92636 917 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 TXNIPQ9H3M7 391 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 UGT2A1Q9Y4X1 527 aa19.32■□□□□ 0.68
ACTN1-220ENST00000556433 FAM157AC9JC47 383 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 PIP5K1CO60331 668 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 CDC14BO60729 498 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 RP2O75695 350 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 IFI30P13284 250 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 IFNA8P32881 189 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 SELENOWP63302 87 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 CCL8P80075 99 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 FMODQ06828 376 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 CD47Q08722 323 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 ST3GAL3Q11203 375 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 MOGQ16653 247 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 ALG10Q5BKT4 473 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 CGB2Q6NT52 195 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 RINLQ6ZS11 566 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 MICU2Q8IYU8 434 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 RFLNBQ8N5W9 214 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 OR1J1Q8NGS3 322 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 NMD3Q96D46 503 aaKnown RBP19.31■□□□□ 0.68
ACTN1-220ENST00000556433 SMURF2Q9HAU4 748 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 LPAR2Q9HBW0 351 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 A4GNTQ9UNA3 340 aa19.31■□□□□ 0.68
ACTN1-220ENST00000556433 IGKV1D-43A0A0B4J1Z2 117 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 ELOVL7A1L3X0 281 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 NPIPB13A6NJU9 1138 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 NPIPB4C9JG80 1138 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 TCF21O43680 179 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 TFP02787 698 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 ZNF32P17041 273 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 DRD4P21917 467 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 STOMP27105 288 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 TOP3AQ13472 1001 aaPredicted RBP19.3■□□□□ 0.68
ACTN1-220ENST00000556433 PCGF3Q3KNV8 242 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 SLC25A47Q6Q0C1 308 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 NABP1Q96AH0 204 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 BPIFA2Q96DR5 249 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 RBP7Q96R05 134 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 HIF1ANQ9NWT6 349 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 HIF3AQ9Y2N7 669 aa19.3■□□□□ 0.68
ACTN1-220ENST00000556433 HTR3EA5X5Y0 456 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 NR2C1P13056 603 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 YAP1P46937 504 aaKnown RBP19.29■□□□□ 0.68
ACTN1-220ENST00000556433 TAF11Q15544 211 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 LZICQ8WZA0 190 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 TMEM186Q96B77 213 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 PRRC1Q96M27 445 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 NKIRAS2Q9NYR9 191 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 EIF3KQ9UBQ5 218 aaKnown RBP19.29■□□□□ 0.68
ACTN1-220ENST00000556433 METRNQ9UJH8 293 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 CAPN7Q9Y6W3 813 aa19.29■□□□□ 0.68
ACTN1-220ENST00000556433 GMNCA6NCL1 334 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 TPD52L2O43399 206 aaKnown RBP19.28■□□□□ 0.68
ACTN1-220ENST00000556433 MT-ND5P03915 603 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 MSMBP08118 114 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 GAAP10253 952 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 CRYBB2P43320 205 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 CTXN1P60606 82 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 RPL27P61353 136 aaKnown RBP19.28■□□□□ 0.68
ACTN1-220ENST00000556433 LMO4P61968 165 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 PSG4Q00888 419 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 GLO1Q04760 184 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 FAM27BQ5VT28 67 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 AKR7LQ8NHP1 331 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 GTF3AQ92664 365 aaKnown RBP19.28■□□□□ 0.68
ACTN1-220ENST00000556433 POM121L2Q96KW2 1035 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 ALG12Q9BV10 488 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 DECR2Q9NUI1 292 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 CMTM6Q9NX76 183 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 RHCGQ9UBD6 479 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 GRIP1Q9Y3R0 1128 aa19.28■□□□□ 0.68
ACTN1-220ENST00000556433 C5orf49A4QMS7 147 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 IGHV3-13P01766 116 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 MAKP20794 623 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 FUT4P22083 530 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 GDI2P50395 445 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms