RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 MECRQ9BV79 373 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C20orf27Q9GZN8 174 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SLC38A1Q9H2H9 487 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 OR51I1Q9H343 314 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 MIEF1Q9NQG6 463 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SLC6A13Q9NSD5 602 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 GIMAP4Q9NUV9 329 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 FAIMQ9NVQ4 179 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SENP1Q9P0U3 644 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SLC17A7Q9P2U7 560 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF69Q9UC07 566 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 LEF1Q9UJU2 399 aaPredicted RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NBEAL1Q6ZS30 2694 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 HYDINQ4G0P3 5121 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TANC2Q9HCD6 1990 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IGKV1D-42A0A075B6H8 117 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 UQCRHLA0A096LP55 91 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMED7-TICAM2A0A0A6YYA0 188 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ARPC4-TTLL3A0A0A6YYG9 625 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 OR6C65A6NJZ3 312 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TTC36A6NLP5 189 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 VSTM5A8MXK1 200 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 B4DSR2 109 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 LRRN3E7EW58 273 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 SLCO1B7G3V0H7 640 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MS4A18H0YCH9 400 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 H0YL77 283 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 HMGN4O00479 90 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PIP5K1BO14986 540 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ANKRD28O15084 1053 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 RIPK2O43353 540 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ITM2AO43736 263 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 EIF4E2O60573 245 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PLIN3O60664 434 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TPST2O60704 377 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PEX11AO75192 247 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MRPL33O75394 65 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 FCN3O75636 299 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PDE5AO76074 875 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV2-5P01817 119 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 HLA-HP01893 362 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ENO1P06733 434 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MSMBP08118 114 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 INHBAP08476 426 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 SNRPAP09012 282 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PABPC4LP0CB38 370 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TFPIP10646 304 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 THRBP10828 461 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 G6PDP11413 515 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CCL2P13500 99 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CBR1P16152 277 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF14P17017 642 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 RPS4Y1P22090 263 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CBLP22681 906 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ME2P23368 584 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 GSTM5P46439 218 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MVDP53602 400 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PSMD4P55036 377 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PKNOX1P55347 436 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 DNAJB13P59910 316 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PRPS1P60891 318 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PSPHP78330 225 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 KCNJ10P78508 379 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ARF1P84077 181 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 HOXC5Q00444 222 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CHRNB3Q05901 458 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 EPS8Q12929 822 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CALCOCO2Q13137 446 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CBFBQ13951 182 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 OR7A5Q15622 319 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZNHIT3Q15649 155 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CHI3L2Q15782 390 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MS4A18Q3C1V0 323 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 GALNTL6Q49A17 601 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 GTDC1Q4AE62 458 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 XKR7Q5GH72 579 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 OTUD3Q5T2D3 398 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ASPHD2Q6ICH7 369 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 FAHD2BQ6P2I3 314 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 NIPAL3Q6P499 406 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TNFAIP8L2Q6P589 184 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 KLC3Q6P597 504 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZCCHC12Q6PEW1 402 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZCCHC23Q6ZST2 131 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IKBIPQ70UQ0 350 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 AAED1Q7RTV5 226 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 GRINAQ7Z429 371 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 C6orf120Q7Z4R8 191 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CCDC91Q7Z6B0 441 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ANKRD46Q86W74 232 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 VRK2Q86Y07 508 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MISPQ8IVT2 679 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 C10orf107Q8IVU9 208 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 DDIASQ8IXT1 998 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM123Q8N131 208 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CLIP4Q8N3C7 705 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 RIBC1Q8N443 379 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMCO5AQ8N6Q1 288 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 KIR3DL3Q8N743 410 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms