RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CPEB3Q8NE35 698 aaKnown RBP11.49□□□□□ -0.57
GCN1-206ENST00000549815 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
GCN1-206ENST00000549815 TPD52L3Q96J77 140 aa11.49□□□□□ -0.57
GCN1-206ENST00000549815 CDH20Q9HBT6 801 aa11.49□□□□□ -0.57
GCN1-206ENST00000549815 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
GCN1-206ENST00000549815 STX18Q9P2W9 335 aaKnown RBP11.49□□□□□ -0.57
GCN1-206ENST00000549815 ZNF346Q9UL40 294 aaKnown RBP11.49□□□□□ -0.57
GCN1-206ENST00000549815 SNX13Q9Y5W8 968 aa11.49□□□□□ -0.57
GCN1-206ENST00000549815 A0A1W2PPW3 197 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 C17orf100A8MU93 164 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 J3KTA2 159 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 WNT9BO14905 357 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 PRSS23O95084 383 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 PTHP01270 115 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 IFI30P13284 250 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 ZNF32P17041 273 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 MAKP20794 623 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 HNF1AP20823 631 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 MAGEB1P43366 347 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 GPR6P46095 362 aaPredicted RBP11.48□□□□□ -0.57
GCN1-206ENST00000549815 CCNIQ14094 377 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 TAF11Q15544 211 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 TBC1D28Q2M2D7 210 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 PABPC1L2AQ5JQF8 200 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 FOXL2NBQ6ZUU3 175 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 OFCC1Q8IZS5 231 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 OR1J2Q8NGS2 313 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
GCN1-206ENST00000549815 SYNPRQ8TBG9 265 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 BPIFA2Q96DR5 249 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
GCN1-206ENST00000549815 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 ZNF275Q9NSD4 429 aaPredicted RBP11.48□□□□□ -0.57
GCN1-206ENST00000549815 TAAR3PQ9P1P4 343 aa11.48□□□□□ -0.57
GCN1-206ENST00000549815 IQCMA0A1B0GVH7 501 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 FAM157AC9JC47 383 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 LCKP06239 509 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 WNT5AP41221 380 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 RAD52P43351 418 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 YAP1P46937 504 aaKnown RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 DVL1P1P54792 670 aaPredicted RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 TMEM33P57088 247 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 KLF3P57682 345 aaPredicted RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 RPL27P61353 136 aaKnown RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 PSG4Q00888 419 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 PLP2Q04941 152 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 LIPEQ05469 1076 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 PRKCDQ05655 676 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 FAM27BQ5VT28 67 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 CBLL1Q75N03 491 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 ARPINQ7Z6K5 226 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 NRMQ8IXM6 262 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 ZNF101Q8IZC7 436 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 NSMAFQ92636 917 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 BCL2L14Q9BZR8 327 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 HINT3Q9NQE9 182 aaKnown RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 NKIRAS2Q9NYR9 191 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 RHCGQ9UBD6 479 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 TMEFF2Q9UIK5 374 aaPredicted RBP11.47□□□□□ -0.57
GCN1-206ENST00000549815 AP3M1Q9Y2T2 418 aa11.47□□□□□ -0.57
GCN1-206ENST00000549815 LOC100509620A0A075B734 347 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 A0A087WUU8 490 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 NME4O00746 187 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 COX4I1P13073 169 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 APLNRP35414 380 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 CTXN1P60606 82 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 LMO4P61968 165 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 HSF2Q03933 536 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 CD47Q08722 323 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
GCN1-206ENST00000549815 TRAM2Q15035 370 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 NKPD1Q17RQ9 610 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 THEM4Q5T1C6 240 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 TSEN54Q7Z6J9 526 aaKnown RBP11.46□□□□□ -0.57
GCN1-206ENST00000549815 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 MEX3DQ86XN8 651 aaKnown RBP11.46□□□□□ -0.57
GCN1-206ENST00000549815 TREML1Q86YW5 311 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 ACOT11Q8WXI4 607 aaPredicted RBP11.46□□□□□ -0.57
GCN1-206ENST00000549815 C11orf40Q8WZ69 217 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 LZICQ8WZA0 190 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 GTF3AQ92664 365 aaKnown RBP11.46□□□□□ -0.57
GCN1-206ENST00000549815 WNT5BQ9H1J7 359 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 LRMDAQ9H2I8 198 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 SLCO1C1Q9NYB5 712 aa11.46□□□□□ -0.57
GCN1-206ENST00000549815 TRAV27A0A087WT01 109 aa11.45□□□□□ -0.58
GCN1-206ENST00000549815 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
GCN1-206ENST00000549815 B4DSR2 109 aa11.45□□□□□ -0.58
GCN1-206ENST00000549815 CXCR6O00574 342 aa11.45□□□□□ -0.58
GCN1-206ENST00000549815 ICMTO60725 284 aa11.45□□□□□ -0.58
GCN1-206ENST00000549815 TFP02787 698 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms