RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TMEM54Q969K7 222 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 TRIM44Q96DX7 344 aaPredicted RBP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 PIK3IP1Q96FE7 263 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF681Q96N22 645 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF382Q96SR6 550 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 LZTS2Q9BRK4 669 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 TMEM43Q9BTV4 400 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 ANKRD19PQ9H560 264 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 FAM49BQ9NUQ9 324 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 ETNK2Q9NVF9 386 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 PSG8Q9UQ74 426 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 PEX16Q9Y5Y5 336 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 KANK1Q14678 1352 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 GPATCH8Q9UKJ3 1502 aaKnown RBP1.72□□□□□ -2.13
CCDC38-204ENST00000546816 TRAV6A0A075B6T7 132 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 C15orf38-AP3S2A0A0A6YYH1 394 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 SNTNA6NMZ2 147 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF850A8MQ14 1090 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 YIF1AO95070 293 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 ATP5C1P36542 298 aaKnown RBP1.72□□□□□ -2.13
CCDC38-204ENST00000546816 AQP2P41181 271 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 CDKN2BP42772 138 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 CEBPDP49716 269 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-204ENST00000546816 CLINT1Q14677 625 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 CCDC152Q4G0S7 254 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 FAM78AQ5JUQ0 283 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 RAET1LQ5VY80 246 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 ASCL5Q7RTU5 278 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 H2BFWTQ7Z2G1 175 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 DHDDSQ86SQ9 333 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 TGIF2LXQ8IUE1 241 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 OR52M1Q8NGK5 317 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 PIBF1Q8WXW3 757 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 MED8Q96G25 268 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 SLC41A3Q96GZ6 507 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 PSKH2Q96QS6 385 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 CDX2Q99626 313 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-204ENST00000546816 SULT4A1Q9BR01 284 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 C12orf10Q9HB07 376 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 POLE4Q9NR33 117 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 PIGLQ9Y2B2 252 aa1.72□□□□□ -2.13
CCDC38-204ENST00000546816 SCN1AP35498 2009 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 H0YCG3 227 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 BPY2O14599 106 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 GMFGO60234 142 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 FABP3P05413 133 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CALM1P0DP23 149 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CALM2P0DP24 149 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CALM3P0DP25 149 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 MAGEA8P43361 318 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 IFNAR2P48551 515 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 ARFIP1P53367 373 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 LRRC23Q53EV4 343 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-204ENST00000546816 ANKRD22Q5VYY1 191 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 PPP1R42Q7Z4L9 355 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 PRSS58Q8IYP2 241 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 C15orf40Q8WUR7 153 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 FAM3DQ96BQ1 224 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 L3HYPDHQ96EM0 354 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CAMK2N2Q96S95 79 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 RNF5Q99942 180 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 RARRES2Q99969 163 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CRACR2AQ9BSW2 395 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 TCHPQ9BT92 498 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 SLC25A2Q9BXI2 301 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 RPF2Q9H7B2 306 aaKnown RBP1.71□□□□□ -2.14
CCDC38-204ENST00000546816 CTSFQ9UBX1 484 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 KIAA1257Q9ULG3 409 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
CCDC38-204ENST00000546816 ADGRL1O94910 1474 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 AHDC1Q5TGY3 1603 aaPredicted RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 A0A0U1RQV1 116 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 A0A1W2PPE3 182 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 CIB4A0PJX0 185 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 K7EM74 188 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 TIMM8AO60220 97 aaPredicted RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 UTS2O95399 124 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 CD74P04233 296 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 IL4P05112 153 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 RAB3BP20337 219 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 GLRA2P23416 452 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 OPRK1P41145 380 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 RORCP51449 518 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 CDH4P55283 916 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 UBE2HP62256 183 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 GPM6BQ13491 265 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 OAFQ86UD1 273 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 CALHM1Q8IU99 346 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 COQ8AQ8NI60 647 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 RNF139Q8WU17 664 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 C17orf50Q8WW18 174 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 RTN4IP1Q8WWV3 396 aaPredicted RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 PLEKHA8Q96JA3 519 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 TRIM62Q9BVG3 475 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 SAV1Q9H4B6 383 aaPredicted RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 GORASP2Q9H8Y8 452 aa1.7□□□□□ -2.14
CCDC38-204ENST00000546816 PTBP2Q9UKA9 531 aaKnown RBP1.7□□□□□ -2.14
CCDC38-204ENST00000546816 CARHSP1Q9Y2V2 147 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms