RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNF83P51522 516 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 NR1H2P55055 460 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 CDK5Q00535 292 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SLC27A4Q6P1M0 643 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SKA3Q8IX90 412 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 TSSK2Q96PF2 358 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 HS3ST6Q96QI5 342 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SH3GL3Q99963 347 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 OSBPL10Q9BXB5 764 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SIAEQ9HAT2 523 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 CRNNQ9UBG3 495 aaPredicted RBP17.87■□□□□ 0.45
HMGA2-211ENST00000545998 DPRXA6NFQ7 191 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 MITFO75030 526 aaPredicted RBP17.86■□□□□ 0.45
HMGA2-211ENST00000545998 FARS2O95363 451 aaKnown RBP17.86■□□□□ 0.45
HMGA2-211ENST00000545998 HLA-HP01893 362 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 GRK5P34947 590 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 CAPZA2P47755 286 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 ESRRGP62508 458 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 GINS1Q14691 196 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 NCMAPQ5T1S8 102 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 ACSM5Q6NUN0 579 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 TMEM200AQ86VY9 491 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 FAM169BQ8N8A8 192 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 CIB1Q99828 191 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 ESRP2Q9H6T0 727 aaKnown RBP17.86■□□□□ 0.45
HMGA2-211ENST00000545998 MOV10Q9HCE1 1003 aaKnown RBP17.86■□□□□ 0.45
HMGA2-211ENST00000545998 KLHL21Q9UJP4 597 aa17.86■□□□□ 0.45
HMGA2-211ENST00000545998 A0A1W2PPR1 153 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 DCTN6O00399 190 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 MGRN1O60291 552 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 KHDRBS3O75525 346 aaKnown RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 BAG2O95816 211 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 IGKV3-15P01624 115 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 IGFBP5P24593 272 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 CRABP1P29762 137 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 CRISP1P54107 249 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 BSPH1Q075Z2 132 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 MDP1Q86V88 176 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 OR6V1Q8N148 313 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 CYB561A3Q8NBI2 242 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 SLC37A3Q8NCC5 494 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 FGFBP3Q8TAT2 258 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 NANOS1Q8WY41 292 aaKnown RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 RBM4BQ9BQ04 359 aaKnown RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 TMEM204Q9BSN7 226 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 RBM4Q9BWF3 364 aaKnown RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 CLEC4MQ9H2X3 399 aaPredicted RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 SEC61A2Q9H9S3 476 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 NOX3Q9HBY0 568 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 SLC25A19Q9HC21 320 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 RPRD1BQ9NQG5 326 aaKnown RBP17.85■□□□□ 0.45
HMGA2-211ENST00000545998 CMC2Q9NRP2 79 aa17.85■□□□□ 0.45
HMGA2-211ENST00000545998 IGLV1-36A0A0B4J1U3 117 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 A0A1W2PPL8 197 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 M0R1B8 84 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 SCG5P05408 212 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 CD79AP11912 226 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 CBR1P16152 277 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 DBPQ10586 325 aaPredicted RBP17.84■□□□□ 0.45
HMGA2-211ENST00000545998 SGCAQ16586 387 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 C3orf36Q3SXR2 165 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 FBXW10Q5XX13 1052 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 DNM1P34Q6PK57 102 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 TMEM108Q6UXF1 575 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 SLC16A14Q7RTX9 510 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 ZBTB46Q86UZ6 589 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 FN3KQ9H479 309 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 RERGLQ9H628 205 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 SRA1Q9HD15 236 aaKnown RBP17.84■□□□□ 0.45
HMGA2-211ENST00000545998 POLE4Q9NR33 117 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 B9D1Q9UPM9 204 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 COA3Q9Y2R0 106 aaPredicted RBP17.84■□□□□ 0.45
HMGA2-211ENST00000545998 ANKRD17O75179 2603 aaKnown RBP17.84■□□□□ 0.45
HMGA2-211ENST00000545998 RTTNQ86VV8 2226 aa17.84■□□□□ 0.45
HMGA2-211ENST00000545998 IGHV1-18A0A0C4DH31 117 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 UBL3O95164 117 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 IFNGP01579 166 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 IGLV1-44P01699 117 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 ALPLP05186 524 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 PATE4P0C8F1 98 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 PTAFRP25105 342 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 CD40P25942 277 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 LAP3P28838 519 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 GUCA1AP43080 201 aaPredicted RBP17.83■□□□□ 0.45
HMGA2-211ENST00000545998 KRTAP10-9P60411 292 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 ELF3P78545 371 aaPredicted RBP17.83■□□□□ 0.45
HMGA2-211ENST00000545998 PIGFQ07326 219 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 CRMP1Q14194 572 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 GSG1Q2KHT4 349 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 FAM27BQ5VT28 67 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 TMEM236Q5W0B7 351 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 GLB1L2Q8IW92 636 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 LRRC18Q8N456 261 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 ZNF75AQ96N20 296 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 FOXN4Q96NZ1 517 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 SLC38A2Q96QD8 506 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 RACGAP1Q9H0H5 632 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 USE1Q9NZ43 259 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 FKBP7Q9Y680 259 aa17.83■□□□□ 0.45
HMGA2-211ENST00000545998 PDZD2O15018 2839 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms