RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 AMBNQ9NP70 447 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
DDX55-208ENST00000541259 UGT2A1Q9Y4X1 527 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 HSPE1-MOB4S4R3N1 261 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 HEATR1Q9H583 2144 aaKnown RBP8.23□□□□□ -1.09
DDX55-208ENST00000541259 TVP23AA6NH52 213 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 CENPBD1B2RD01 187 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 DHHO43323 396 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 AHCYL1O43865 530 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 MPZL2O60487 215 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 SMNDC1O75940 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
DDX55-208ENST00000541259 KRT33AO76009 404 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 MPZL1O95297 269 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 BMP5P22003 454 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 PAICSP22234 425 aaKnown RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 CENPAP49450 140 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 ZNF133P52736 654 aaPredicted RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 ROR2Q01974 943 aaKnown RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 FAPQ12884 760 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 MED21Q13503 144 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 CEACAM16Q2WEN9 425 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 SLC25A30Q5SVS4 291 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 C10orf128Q5T292 105 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 LINC01590Q5TEZ4 76 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 NXNL2Q5VZ03 156 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 MEPCEQ7L2J0 689 aaKnown RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 ZBTB46Q86UZ6 589 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 ATCAYQ86WG3 371 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 POMGNT2Q8NAT1 580 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 PROKR2Q8NFJ6 384 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 SMAP2Q8WU79 429 aaPredicted RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 KISS1RQ969F8 398 aaPredicted RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 ZMYND19Q96E35 227 aaPredicted RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 CCDC120Q96HB5 630 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 TEAD3Q99594 435 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 RHNO1Q9BSD3 238 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 SFXN3Q9BWM7 321 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 ULBP2Q9BZM5 246 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 Q9H521 79 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 CRLF2Q9HC73 371 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 CLN6Q9NWW5 311 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 H2AFY2Q9P0M6 372 aaPredicted RBP8.22□□□□□ -1.09
DDX55-208ENST00000541259 UPB1Q9UBR1 384 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 PROCRQ9UNN8 238 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 FKBP7Q9Y680 259 aa8.22□□□□□ -1.09
DDX55-208ENST00000541259 A0A1W2PPL8 197 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 RPL36A-HNRNPH2H7BZ11 118 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 XPNPEP2O43895 674 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 KHDRBS3O75525 346 aaKnown RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 SEC14L2O76054 403 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 GLCEO94923 617 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 APOL3O95236 402 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 IL18BPO95998 194 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 TFP02787 698 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 ITGA5P08648 1049 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 CD8BP10966 210 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 PSKH1P11801 424 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 CRABP1P29762 137 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 GSTT1P30711 240 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 OPRM1P35372 400 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 CDH11P55287 796 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 RPS7P62081 194 aaKnown RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 ARF1P84077 181 aaKnown RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 TNP2Q05952 138 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 CDSNQ15517 529 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 TSC22D1Q15714 1073 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 MEP1BQ16820 701 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 C6orf141Q5SZD1 244 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 MEDAGQ5VYS4 303 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 FBXW9Q5XUX1 488 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 KRT80Q6KB66 452 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 ZNF474Q6S9Z5 364 aaPredicted RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 UGT2A3Q6UWM9 527 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 SHFQ7M4L6 423 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 LUZP2Q86TE4 346 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 RELL2Q8NC24 303 aaPredicted RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 OR6K6Q8NGW6 343 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 OR2T4Q8NH00 348 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 SEC61A2Q9H9S3 476 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 B3GAT2Q9NPZ5 323 aa8.21□□□□□ -1.1
DDX55-208ENST00000541259 MRPL22Q9NWU5 206 aaKnown RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 ZNF629Q9UEG4 869 aaPredicted RBP8.21□□□□□ -1.1
DDX55-208ENST00000541259 A0A1B0GUH1 482 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 SH3D21A4FU49 640 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 OR6C65A6NJZ3 312 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 EEF1E1-BLOC1S5C9J1V9 151 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 ZNF587BE7ETH6 402 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 PRODHO43272 600 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 EEF1E1O43324 174 aaKnown RBP8.2□□□□□ -1.1
DDX55-208ENST00000541259 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
DDX55-208ENST00000541259 ADRA2AP08913 450 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 MRPL3P09001 348 aaKnown RBP8.2□□□□□ -1.1
DDX55-208ENST00000541259 GAAP10253 952 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 LAP3P28838 519 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 HTR1FP30939 366 aa8.2□□□□□ -1.1
DDX55-208ENST00000541259 RPS27P42677 84 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms