RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ULBP2Q9BZM5 246 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 MYH9P35579 1960 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 PRSS38A1L453 326 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 ZNF724A8MTY0 619 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 OR7C1O76099 320 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 IGFBP1P08833 259 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 CSNK1G2P78368 415 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 ZNF485Q8NCK3 441 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 TTC9Q92623 222 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 CYBAP13498 195 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 RAB11AP62491 216 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 OR1J1Q8NGS3 322 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 NUDT8Q8WV74 236 aa13.75□□□□□ -0.21
SMARCA4-207ENST00000541122 CD37P11049 281 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 RASD2Q96D21 266 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 TCTN2Q96GX1 697 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 TOLLIPQ9H0E2 274 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 URGCP-MRPS24S4R325 110 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 SNCAP37840 140 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 RNF4P78317 190 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 BAXQ07812 192 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 ELFN2Q5R3F8 820 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 SHEQ5VZ18 495 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 MARVELD1Q9BSK0 173 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 CLDND1Q9NY35 253 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 AK3Q9UIJ7 227 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 TMEM235A6NFC5 223 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 E5RGE8 158 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 EPXP11678 715 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 PCMT1P22061 227 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 EGR3Q06889 387 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 ECH1Q13011 328 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 MANEAQ5SRI9 462 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 MORN1Q5T089 497 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 C8orf33Q9H7E9 229 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 CCDC163A0A0D9SF12 145 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 PRAMEF26H0Y7S4 382 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 EPHA2P29317 976 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 FCGR2CP31995 323 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 MAP2K6P52564 334 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 GRB2P62993 217 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 MMP21Q8N119 569 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 SPICQ8N5J4 248 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
SMARCA4-207ENST00000541122 TMED7-TICAM2A0A0A6YYA0 188 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 BET1O15155 118 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 NME2P1O60361 137 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 CTSLP07711 333 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 RPL12P30050 165 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 IL2RGP31785 369 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 TMEM182Q6ZP80 229 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 ANGPTL5Q86XS5 388 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 SLC39A11Q8N1S5 342 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 SLC16A11Q8NCK7 471 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 PIGCQ92535 297 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 TMEM18Q96B42 140 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 ARV1Q9H2C2 271 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 MOB1AQ9H8S9 216 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 TMED7Q9Y3B3 224 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 NKX2-1P43699 371 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 OR10A3P58181 314 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 MFAP5Q13361 173 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 RAB30Q15771 203 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 TMEM88Q6PEY1 159 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 RNF165Q6ZSG1 346 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 OR8D4Q8NGM9 314 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 HPSE2Q8WWQ2 592 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 C2orf50Q96LR7 162 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 CSF3RQ99062 836 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 LYRM4Q9HD34 91 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 SOX18P35713 384 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 P2RX1P51575 399 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 OR2B8PP59922 312 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 DUSP8Q13202 625 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 Q96M85 177 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 ZMAT3Q9HA38 289 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 MYOTQ9UBF9 498 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 RANP62826 216 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 ZNF385BQ569K4 471 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 DUSP18Q8NEJ0 188 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 GABRQQ9UN88 632 aa13.73□□□□□ -0.21
SMARCA4-207ENST00000541122 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
SMARCA4-207ENST00000541122 FITM1A5D6W6 292 aa13.72□□□□□ -0.21
SMARCA4-207ENST00000541122 ZFP92A6NM28 416 aa13.72□□□□□ -0.21
SMARCA4-207ENST00000541122 TXNDC12O95881 172 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms