RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CR1P17927 2039 aa8.97□□□□□ -0.97
CDCA3-208ENST00000540683 LOC100289279A0A1B0GTE1 492 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 PLSCR5A0PG75 271 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 SH3PXD2BA1X283 911 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 C12orf71A8MTZ7 269 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 EFCAB9A8MZ26 197 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 VWC2LB2RUY7 222 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 LMX1BO60663 402 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 TRMUO75648 421 aaKnown RBP8.96□□□□□ -0.98
CDCA3-208ENST00000540683 SEC14L2O76054 403 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 STAMBPO95630 424 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 THY1P04216 161 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 F13BP05160 661 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 LCKP06239 509 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 CELA3BP08861 270 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 ADRA2AP08913 450 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 TSPAN19P0C672 248 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 RPL4P36578 427 aaKnown RBP8.96□□□□□ -0.98
CDCA3-208ENST00000540683 IFNGR2P38484 337 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 AQP2P41181 271 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 GDI2P50395 445 aaKnown RBP8.96□□□□□ -0.98
CDCA3-208ENST00000540683 CRYBA2P53672 197 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 PRKCDQ05655 676 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 MELKQ14680 651 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 RAB39AQ14964 217 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 FXNQ16595 210 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 FAM27BQ5VT28 67 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 GPR139Q6DWJ6 353 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 PGM2L1Q6PCE3 622 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 MBOAT2Q6ZWT7 520 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 NKAIN4Q8IVV8 208 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 SLC15A3Q8IY34 581 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 LRRC17Q8N6Y2 441 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 MAPK1IP1LQ8NDC0 245 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 OR4D11Q8NGI4 311 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 SYNPRQ8TBG9 265 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 TMEM158Q8WZ71 300 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 RDH5Q92781 318 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 MCUR1Q96AQ8 359 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 DIRC2Q96SL1 478 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 NKIRAS2Q9NYR9 191 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 ARMCX1Q9P291 453 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 NDRG4Q9ULP0 352 aaKnown RBP8.96□□□□□ -0.98
CDCA3-208ENST00000540683 ALPK2Q86TB3 2170 aa8.96□□□□□ -0.98
CDCA3-208ENST00000540683 A0A096LNT2 108 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 A0A1W2PRQ8 180 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 DCTN3O75935 186 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SERPINA1P01009 418 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TFP02787 698 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 CST2P09228 141 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TACSTD2P09758 323 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF250P15622 560 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 RHCEP18577 417 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SLC7A2P52569 658 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 UCP2P55851 309 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TAGLNQ01995 201 aaKnown RBP8.95□□□□□ -0.98
CDCA3-208ENST00000540683 KRTAP1-1Q07627 177 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SLC3A1Q07837 685 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SCRN3Q0VDG4 424 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 DGCR6Q14129 220 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SGCAQ16586 387 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF718Q3SXZ3 478 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 ARMC4Q5T2S8 1044 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TMPRSS11FQ6ZWK6 438 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 POU5F2Q8N7G0 328 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 ANKS4BQ8N8V4 417 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SYT14Q8NB59 555 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 PFN4Q8NHR9 129 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TIMD4Q96H15 378 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SH3GL3Q99963 347 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 EGLN1Q9GZT9 426 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 C20orf141Q9NUB4 165 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 DECR2Q9NUI1 292 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF446Q9NWS9 450 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 MAGEL2Q9UJ55 1249 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 A4GNTQ9UNA3 340 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 TIMM10BQ9Y5J6 103 aa8.95□□□□□ -0.98
CDCA3-208ENST00000540683 SONP18583 2426 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 B4DSR2 109 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 J3QW42 95 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 TGFAP01135 160 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 H1F0P07305 194 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 IGHV4-31P0DP07 118 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 COX5BP10606 129 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 SRD5A1P18405 259 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 MSR1P21757 451 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 STOMP27105 288 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 GPR6P46095 362 aaPredicted RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 RPS6KA3P51812 740 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 CDH15P55291 814 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 CTXN1P60606 82 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ZBED5Q49AG3 693 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 SAMD4BQ5PRF9 694 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 LIPNQ5VXI9 398 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 CGB2Q6NT52 195 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 DNM1P34Q6PK57 102 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms