RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 NR1H2P55055 460 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TUBA1BP68363 451 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TUBA4AP68366 448 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 MRPS34P82930 218 aaKnown RBP6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 BSPH1Q075Z2 132 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PGGHGQ32M88 737 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 BEX5Q5H9J7 111 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 NCMAPQ5T1S8 102 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 KDM4DQ6B0I6 523 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 FOXL2NBQ6ZUU3 175 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TUBA1AQ71U36 451 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TMEM200AQ86VY9 491 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 HIPK1Q86Z02 1210 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 ZDHHC13Q8IUH4 622 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 C10orf67Q8IYJ2 551 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PARP8Q8N3A8 854 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 LNX2Q8N448 690 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 SLC22A24Q8N4F4 322 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 ATG16L2Q8NAA4 619 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 SDR9C7Q8NEX9 313 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 OR2T33Q8NG76 320 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 OR4Q3Q8NH05 313 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TEX47Q8TBZ9 253 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 HTRA1Q92743 480 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 MUCL1Q96DR8 90 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PIK3IP1Q96FE7 263 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PLPPR2Q96GM1 343 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 CENPNQ96H22 339 aaPredicted RBP6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 RBP7Q96R05 134 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 SNX18Q96RF0 628 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PKP2Q99959 881 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TMEM204Q9BSN7 226 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 TSSK6Q9BXA6 273 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 SYT4Q9H2B2 425 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 CLEC4MQ9H2X3 399 aaPredicted RBP6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF556Q9HAH1 456 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 NOX3Q9HBY0 568 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 S100A14Q9HCY8 104 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 NGBQ9NPG2 151 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PAPOLBQ9NRJ5 636 aaKnown RBP6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 B3GNT2Q9NY97 397 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 CRNNQ9UBG3 495 aaPredicted RBP6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 BAIAP2Q9UQB8 552 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 POFUT2Q9Y2G5 429 aa6.09□□□□□ -1.43
LPCAT3-209ENST00000540060 PLCE1Q9P212 2302 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 IGLV1-36A0A0B4J1U3 117 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 IGHV1-18A0A0C4DH31 117 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 A0A1W2PPL8 197 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 OR6C68A6NDL8 312 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 DPRXA6NFQ7 191 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SAC3D1A6NKF1 404 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 H3BN98 237 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 DCTN6O00399 190 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 UBL3O95164 117 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 IGKV3-15P01624 115 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 IGLV1-44P01699 117 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 HLA-HP01893 362 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 OR8G3PP0DMU2 310 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 VSIG8P0DPA2 414 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 PAX7P23759 505 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NOS3P29474 1203 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 CDAP32320 146 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 GRK5P34947 590 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF83P51522 516 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 KRTAP10-9P60411 292 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 UBE2NP61088 152 aaKnown RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 PPP2R2BQ00005 443 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SPOCK1Q08629 439 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ETFDHQ16134 617 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 GSG1Q2KHT4 349 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ALKBH2Q6NS38 261 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 LEG1Q6P5S2 330 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 MYPOPQ86VE0 399 aaPredicted RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 CDC20BQ86Y33 519 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SKA3Q8IX90 412 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 CCDC36Q8IYA8 594 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 PQLC1Q8N2U9 271 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 IQCF1Q8N6M8 205 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NPEPL1Q8NDH3 523 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ICA1LQ8NDH6 482 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 OR4K13Q8NH42 304 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NANOS1Q8WY41 292 aaKnown RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NSMAFQ92636 917 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 STMN2Q93045 179 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF75AQ96N20 296 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 TSSK2Q96PF2 358 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC38A2Q96QD8 506 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NMNAT3Q96T66 252 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SH3GL3Q99963 347 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 NUAK2Q9H093 628 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 FN3KQ9H479 309 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 ESRP2Q9H6T0 727 aaKnown RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC25A19Q9HC21 320 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 MOV10Q9HCE1 1003 aaKnown RBP6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 KRT84Q9NSB2 600 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 TMEFF2Q9UIK5 374 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms