RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PLSCR3Q9NRY6 295 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 TRAV6A0A075B6T7 132 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 A6NIZ1 184 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 CENPBD1B2RD01 187 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SHISA8B8ZZ34 492 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GDF9O60383 454 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 OR2J2O76002 312 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 MPZL1O95297 269 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 MAS1P04201 325 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 CYC1P08574 325 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 FGF5P12034 268 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 IFNGR1P15260 489 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 RAP1BP61224 184 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 RAP1AP62834 184 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 LINGO2Q7L985 606 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SERPINA12Q8IW75 414 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 OR2I1PQ8NGU4 316 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 IFI44Q8TCB0 444 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GCDHQ92947 438 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 DDIT4LQ96D03 193 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 TRAF4Q9BUZ4 470 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GHITMQ9H3K2 345 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 FANCFQ9NPI8 374 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 PPP4R1LQ9P1A2 415 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 COPZ2Q9P299 210 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SLC22A13Q9Y226 551 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 WDFY3Q8IZQ1 3526 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 LIPT2A6NK58 231 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 H0YC42 278 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 H3BSH0 61 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 YKT6O15498 198 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 SULT1B1O43704 296 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 SRSF10O75494 262 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 DHFRP00374 187 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 C1QBP02746 253 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MSX1P28360 303 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MNDAP41218 407 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 GZMKP49863 264 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 DAP3P51398 398 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MAP2K6P52564 334 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 SCAND1P57086 179 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 FMODQ06828 376 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 EIF2B1Q14232 305 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 PCK2Q16822 640 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 PHF19Q5T6S3 580 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 FAM69BQ5VUD6 431 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 KCTD18Q6PI47 426 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 OR52I2Q8NH67 350 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 POC1BQ8TC44 478 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 THRSPQ92748 146 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 S100A16Q96FQ6 103 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 POTEKPQ9BYX7 375 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 C19orf25Q9UFG5 118 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 LRP12Q9Y561 859 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 VPS13AQ96RL7 3174 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ANXA2P2A6NMY6 339 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 NPIPA5E9PKD4 350 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MT-ND4P03905 459 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 CFIP05156 583 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 CDK2P24941 298 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ERP29P30040 261 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 CCKBRP32239 447 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 CCR6P51684 374 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ART1P52961 327 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 TLE3Q04726 772 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 FAPQ12884 760 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 SNTB2Q13425 540 aaKnown RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 Q5BKY6 102 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 OR7E24Q6IFN5 339 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 EML6Q6ZMW3 1958 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 MDGA2Q7Z553 956 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF275Q9NSD4 429 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-208ENST00000538333 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 NPIPA1Q9UND3 350 aa12.56□□□□□ -0.4
LIMK1-208ENST00000538333 H3BML4 177 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms