RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 Q96M85 177 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 FUZQ9BT04 418 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 GRIP2Q9C0E4 1043 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 C1orf198Q9H425 327 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 BARX1Q9HBU1 254 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 NOX3Q9HBY0 568 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 CA10Q9NS85 328 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 IER3IP1Q9Y5U9 82 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 LYVE1Q9Y5Y7 322 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 PRSS37A4D1T9 235 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 SOCS2O14508 198 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 PTP4A3O75365 173 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 OR4A8P0C604 315 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 PAX1P15863 534 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 CALCRP30988 508 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 SERPINF1P36955 418 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 PCBD1P61457 104 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 SNTB2Q13425 540 aaKnown RBP11.61□□□□□ -0.55
CAPN1-227ENST00000533909 RAB35Q15286 201 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 ETFDHQ16134 617 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 KRT80Q6KB66 452 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 PRSS57Q6UWY2 283 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 CLDN22Q8N7P3 220 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 OR1J2Q8NGS2 313 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 RASD2Q96D21 266 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 Q96MF0 132 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 ERMAPQ96PL5 475 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-227ENST00000533909 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-227ENST00000533909 CHID1Q9BWS9 393 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 NRIP3Q9NQ35 241 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 U3KQV3 271 aa11.61□□□□□ -0.55
CAPN1-227ENST00000533909 SLC22A23A1A5C7 686 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 B9A039 149 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 OVOL3O00110 214 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ACOT8O14734 319 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 PPP1R3DO95685 299 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 CST1P01037 141 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 CD8AP01732 235 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 SERPINA5P05154 406 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF14P17017 642 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF26P17031 533 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 MSR1P21757 451 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 APLNRP35414 380 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 CENPAP49450 140 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF133P52736 654 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 RPS23P62266 143 aaKnown RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 BNIP1Q12981 228 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 TSPAN31Q12999 210 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 TBC1D28Q2M2D7 210 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 RFX4Q33E94 735 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 MESTQ5EB52 335 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 RPL13AP3Q6NVV1 102 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 C1orf94Q6P1W5 598 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 PGBD2Q6P3X8 592 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 DNM1P34Q6PK57 102 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 MYPOPQ86VE0 399 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ALDH16A1Q8IZ83 802 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 OR9Q2Q8NGE9 314 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 IGFBPL1Q8WX77 278 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 SLC7A6OSQ96CW6 309 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 NMD3Q96D46 503 aaKnown RBP11.6□□□□□ -0.55
CAPN1-227ENST00000533909 SAMD8Q96LT4 415 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 GPA33Q99795 319 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 OR52D1Q9H346 318 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 UGT2A1Q9Y4X1 527 aa11.6□□□□□ -0.55
CAPN1-227ENST00000533909 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 GSC2O15499 205 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 SLC16A7O60669 478 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 E2F6O75461 281 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 KHDRBS3O75525 346 aaKnown RBP11.59□□□□□ -0.55
CAPN1-227ENST00000533909 RENP00797 406 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 ERCC1P07992 297 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-227ENST00000533909 APEHP13798 732 aaKnown RBP11.59□□□□□ -0.55
CAPN1-227ENST00000533909 NR4A1P22736 598 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 LAP3P28838 519 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 THBS4P35443 961 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 GSSP48637 474 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 HMGA2P52926 109 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 NUDT6P53370 316 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 HGFACQ04756 655 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 PPP1R8Q12972 351 aaKnown RBP11.59□□□□□ -0.55
CAPN1-227ENST00000533909 GK3PQ14409 553 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 MICAQ29983 383 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 PABPC1L2AQ5JQF8 200 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 FAM27BQ5VT28 67 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 FAM122BQ7Z309 247 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 ADGRG5Q8IZF4 528 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms