RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MMP7P09237 267 aaPredicted RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 PATE4P0C8F1 98 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 NPR2P20594 1047 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 CDAP32320 146 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 PTDSS1P48651 473 aaKnown RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 RASSF2P50749 326 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 HGFACQ04756 655 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 GK3PQ14409 553 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 PRSS57Q6UWY2 283 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 ZNF620Q6ZNG0 422 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 ZNF584Q8IVC4 421 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 MUC15Q8N387 334 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 WFDC11Q8NEX6 87 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 NUP37Q8NFH4 326 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 OR4F15Q8NGB8 312 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 RASD2Q96D21 266 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 PERPQ96FX8 193 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 REEP1Q9H902 201 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 CBLN4Q9NTU7 201 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 TEP1Q99973 2627 aaKnown RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 FLNAP21333 2647 aaKnown RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 H7C1C5 153 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 XKRYO14609 159 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 ARPC3O15145 178 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 CCNB2O95067 398 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 APOBEC3AP31941 199 aaPredicted RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 FABP6P51161 128 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 RPS6KA3P51812 740 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 LCN6P62502 163 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 PPP1R8Q12972 351 aaKnown RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 SLC16A14Q7RTX9 510 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 ADCK1Q86TW2 530 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 FBXL14Q8N1E6 418 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 NSMAFQ92636 917 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 CA10Q9NS85 328 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 VSX1Q9NZR4 365 aaPredicted RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 SAMHD1Q9Y3Z3 626 aaKnown RBP17.72■□□□□ 0.43
CCS-208ENST00000533244 IER3IP1Q9Y5U9 82 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 IMPA2O14732 288 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 SERPINA5P05154 406 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 ZNF35P13682 527 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 SLC6A6P31641 620 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 RAB39AQ14964 217 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 MICAQ29983 383 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 SLC36A2Q495M3 483 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 Q5PR19 223 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 FAM27BQ5VT28 67 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 PAPD5Q8NDF8 572 aaKnown RBP17.71■□□□□ 0.43
CCS-208ENST00000533244 TMUB1Q9BVT8 246 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 LRMDAQ9H2I8 198 aa17.71■□□□□ 0.43
CCS-208ENST00000533244 PPP1R3DO95685 299 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 GASTP01350 101 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 CDKN1AP38936 164 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 TMEM53Q6P2H8 277 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 PTCHD4Q6ZW05 846 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 SPATA24Q86W54 205 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 SAMD8Q96LT4 415 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 DGCR6LQ9BY27 220 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 MMADHCQ9H3L0 296 aaPredicted RBP17.7■□□□□ 0.42
CCS-208ENST00000533244 ZNF442Q9H7R0 627 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 CDH10Q9Y6N8 788 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 U3KQV3 271 aa17.7■□□□□ 0.42
CCS-208ENST00000533244 SOCS2O14508 198 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 CST1P01037 141 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 CTLA4P16410 223 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 CDKN2AP42771 156 aaKnown RBP17.69■□□□□ 0.42
CCS-208ENST00000533244 ADIPOQQ15848 244 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 ETFDHQ16134 617 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 SWI5Q1ZZU3 235 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 MST1LQ2TV78 715 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 LRRC18Q8N456 261 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 AQP11Q8NBQ7 271 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 GTPBP3Q969Y2 492 aaKnown RBP17.69■□□□□ 0.42
CCS-208ENST00000533244 ERMAPQ96PL5 475 aaPredicted RBP17.69■□□□□ 0.42
CCS-208ENST00000533244 SNX18Q96RF0 628 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 SYT4Q9H2B2 425 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 IL20Q9NYY1 176 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 MED13LQ71F56 2210 aa17.69■□□□□ 0.42
CCS-208ENST00000533244 CST2P09228 141 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 NR4A1P22736 598 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 ATP5J2P56134 94 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 SGCAQ16586 387 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 RPL13AP3Q6NVV1 102 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 RASSF6Q6ZTQ3 369 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 YTHDF3Q7Z739 585 aaKnown RBP17.68■□□□□ 0.42
CCS-208ENST00000533244 SLCO4A1Q96BD0 722 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 FBXO17Q96EF6 278 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 TRMT61AQ96FX7 289 aaKnown RBP17.68■□□□□ 0.42
CCS-208ENST00000533244 C1orf198Q9H425 327 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 EGLN3Q9H6Z9 239 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 POLE4Q9NR33 117 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 DLL4Q9NR61 685 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 ACANP16112 2415 aa17.68■□□□□ 0.42
CCS-208ENST00000533244 ARRDC5A6NEK1 342 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 H7C417 338 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 IDH3BO43837 385 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 FKBP6O75344 327 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 SCG5P05408 212 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 ZNF32P17041 273 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 MSR1P21757 451 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms