RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PLSCR4Q9NRQ2 329 aa16.79■□□□□ 0.28
SMPD1-205ENST00000531303 WARS2Q9UGM6 360 aaKnown RBP16.79■□□□□ 0.28
SMPD1-205ENST00000531303 MOKQ9UQ07 419 aa16.79■□□□□ 0.28
SMPD1-205ENST00000531303 RPL36Q9Y3U8 105 aaKnown RBP16.79■□□□□ 0.28
SMPD1-205ENST00000531303 FAM208BQ5VWN6 2430 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 LRRTM2O43300 516 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 OPRM1P35372 400 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 NAA10P41227 235 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-205ENST00000531303 GLO1Q04760 184 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 SGCAQ16586 387 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 MEP1BQ16820 701 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 C10orf128Q5T292 105 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 ZNF540Q8NDQ6 660 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 SCN3BQ9NY72 215 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 UGT2A1Q9Y4X1 527 aa16.78■□□□□ 0.28
SMPD1-205ENST00000531303 SMG1Q96Q15 3661 aaKnown RBP16.77■□□□□ 0.28
SMPD1-205ENST00000531303 SELENOFO60613 162 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 CGAP01215 116 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 SCG5P05408 212 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 LAP3P28838 519 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 CHN2P52757 468 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 RBM48Q5RL73 367 aaKnown RBP16.77■□□□□ 0.28
SMPD1-205ENST00000531303 AHSA2Q719I0 299 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 LUZP2Q86TE4 346 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 ERI1Q8IV48 349 aaKnown RBP16.77■□□□□ 0.28
SMPD1-205ENST00000531303 LIX1LQ8IVB5 337 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 OR4F15Q8NGB8 312 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 SGCDQ92629 289 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 GGHQ92820 318 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 WDR76Q9H967 626 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 EMC7Q9NPA0 242 aa16.77■□□□□ 0.28
SMPD1-205ENST00000531303 HIVEP3Q5T1R4 2406 aa16.77■□□□□ 0.27
SMPD1-205ENST00000531303 CACNA1CQ13936 2221 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 EEF1E1-BLOC1S5C9J1V9 151 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 EEF1E1O43324 174 aaKnown RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 TFP02787 698 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 CRHBPP24387 322 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 EEF1B2P24534 225 aaKnown RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 GUCA1AP43080 201 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 ZNF133P52736 654 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 HCCSP53701 268 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 CXCR4P61073 352 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 ARF1P84077 181 aaKnown RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 PIGFQ07326 219 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 ABHD12BQ7Z5M8 362 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 C11orf40Q8WZ69 217 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 LGALS12Q96DT0 336 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 PLCXD1Q9NUJ7 323 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 MRPL22Q9NWU5 206 aaKnown RBP16.76■□□□□ 0.27
SMPD1-205ENST00000531303 MALT1Q9UDY8 824 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 PSORS1C1Q9UIG5 152 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 MYRFQ9Y2G1 1151 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 TPRKBQ9Y3C4 175 aa16.76■□□□□ 0.27
SMPD1-205ENST00000531303 A0A1B0GUH1 482 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 DVL2O14641 736 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 GAAP10253 952 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 B4GALT1P15291 398 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 ZNF823P16415 610 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 RPS27P42677 84 aaKnown RBP16.75■□□□□ 0.27
SMPD1-205ENST00000531303 CSNK2BP67870 215 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 HSF2Q03933 536 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 ZNF813Q6ZN06 617 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 LRRC18Q8N456 261 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 SLC26A10Q8NG04 563 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 OR10H5Q8NGA6 315 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 OR6N2Q8NGY6 317 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 CHD6Q8TD26 2715 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 CNN2Q99439 309 aaKnown RBP16.75■□□□□ 0.27
SMPD1-205ENST00000531303 FOXB1Q99853 325 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 ADGRL4Q9HBW9 690 aa16.75■□□□□ 0.27
SMPD1-205ENST00000531303 ZNF629Q9UEG4 869 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-205ENST00000531303 NCOA6Q14686 2063 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-205ENST00000531303 A0A096LPE4 126 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 A0A1W2PPZ6 126 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 RPL36A-HNRNPH2H7BZ11 118 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 PYCARD-AS1I3L0S3 204 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 IL18BPO95998 194 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 ITGA5P08648 1049 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 RPSAP08865 295 aaKnown RBP16.74■□□□□ 0.27
SMPD1-205ENST00000531303 CCDC159P0C7I6 412 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 CD8BP10966 210 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 IGHV1-2P23083 117 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 MPGP29372 298 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 BLVRAP53004 296 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 ADAM8P78325 824 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 TMED1Q13445 227 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 TSC22D1Q15714 1073 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 Q6ZT83 130 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 CCDC120Q96HB5 630 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 INTS14Q96SY0 518 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 TBX5Q99593 518 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 COPS4Q9BT78 406 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 POLE4Q9NR33 117 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 TMEM38BQ9NVV0 291 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 PAK1IP1Q9NWT1 392 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-205ENST00000531303 HAO2Q9NYQ3 351 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 ERVK-18Q9QC07 812 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 COMMD3-BMI1R4GMX3 469 aa16.74■□□□□ 0.27
SMPD1-205ENST00000531303 EFCAB10A6NFE3 127 aa16.73■□□□□ 0.27
SMPD1-205ENST00000531303 ZNF99A8MXY4 864 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms