RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 DRD4P21917 467 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 PCMT1P22061 227 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 APLNRP35414 380 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 UCP2P55851 309 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 KLF3P57682 345 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 MRPS11P82912 194 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 ST3GAL3Q11203 375 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 ARMC4Q5T2S8 1044 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 LIPNQ5VXI9 398 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 TMEM154Q6P9G4 183 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 ICA1LQ8NDH6 482 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 OR2T12Q8NG77 320 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 SNX33Q8WV41 574 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 BCL2L14Q9BZR8 327 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 CCNB1IP1Q9NPC3 277 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 HINT3Q9NQE9 182 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 SLCO1C1Q9NYB5 712 aa19.09■□□□□ 0.65
TRAPPC4-210ENST00000531290 HTR3EA5X5Y0 456 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 FAM220BPB1ANY3 271 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 NDUFAB1O14561 156 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 PPIHO43447 177 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 CLPTM1O96005 669 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 NR2C1P13056 603 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 ZNF250P15622 560 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 ZNF133P52736 654 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 CD47Q08722 323 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 MOGQ16653 247 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 ALG10Q5BKT4 473 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 C10orf128Q5T292 105 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 LZICQ8WZA0 190 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 ZNF416Q9BWM5 594 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 NARFLQ9H6Q4 476 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 SMURF2Q9HAU4 748 aa19.08■□□□□ 0.64
TRAPPC4-210ENST00000531290 ELOVL7A1L3X0 281 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 NPIPB13A6NJU9 1138 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 C17orf100A8MU93 164 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 NPIPB4C9JG80 1138 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 SLC2A10O95528 541 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 TSPAN19P0C672 248 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 SAGP10523 405 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 CCNOP22674 350 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 CDAP32320 146 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 NUDT2P50583 147 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 DVL1P1P54792 670 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 SELENOWP63302 87 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 MRPS34P82930 218 aaKnown RBP19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 SGCAQ16586 387 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 PCGF3Q3KNV8 242 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 MICU2Q8IYU8 434 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 NSMAFQ92636 917 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 YIPF5Q969M3 257 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 RBP7Q96R05 134 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 C19orf24Q9BVV8 132 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 TXNIPQ9H3M7 391 aa19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 ZNF275Q9NSD4 429 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC4-210ENST00000531290 IGLV3-9A0A075B6K5 115 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 MT-ND5P03915 603 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 MMP7P09237 267 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 IFI30P13284 250 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 MAGEB1P43366 347 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 ERVS71-1P61550 626 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 SRSF2Q01130 221 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 TOP3AQ13472 1001 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 TAF11Q15544 211 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 PABPC1L2AQ5JQF8 200 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 GLCCI1Q86VQ1 547 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 CLDND2Q8NHS1 167 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 HDAC2Q92769 488 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 BPIFA2Q96DR5 249 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 PRRC1Q96M27 445 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 EIF3KQ9UBQ5 218 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 HIF3AQ9Y2N7 669 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 ARL2BPQ9Y2Y0 163 aa19.06■□□□□ 0.64
TRAPPC4-210ENST00000531290 GSTA4O15217 222 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 NCR1O76036 304 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 TFP02787 698 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 STOMP27105 288 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 PRDX6P30041 224 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 GUCA1AP43080 201 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 CCL8P80075 99 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 UNQ6126/PRO20091Q6UXV3 157 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 HACD2Q6Y1H2 254 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 TREML1Q86YW5 311 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 RFLNBQ8N5W9 214 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 CPEB3Q8NE35 698 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 OR1J1Q8NGS3 322 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 TSPAN32Q96QS1 320 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 RACGAP1Q9H0H5 632 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 MYLK2Q9H1R3 596 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 TREM2Q9NZC2 230 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 A4GNTQ9UNA3 340 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 UGT2A1Q9Y4X1 527 aa19.05■□□□□ 0.64
TRAPPC4-210ENST00000531290 TPD52L2O43399 206 aaKnown RBP19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 PIP5K1CO60331 668 aa19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 CDC14BO60729 498 aa19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 DCTN3O75935 186 aa19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 ZNF32P17041 273 aa19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 YAP1P46937 504 aaKnown RBP19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 RPL27P61353 136 aaKnown RBP19.04■□□□□ 0.64
TRAPPC4-210ENST00000531290 TEKQ02763 1124 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms