RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 LCATP04180 440 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 HTR3AP46098 478 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 POU4F3Q15319 338 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 ESX1Q8N693 406 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 CHRNA9Q9UGM1 479 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 FBXL2Q9UKC9 423 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 B3GNT3Q9Y2A9 372 aa11.39□□□□□ -0.59
BDNF-215ENST00000530861 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
BDNF-215ENST00000530861 FRMPD3Q5JV73 1810 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 CDK2P24941 298 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 GDF1P27539 372 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR3A3P47888 321 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR3A2P47893 321 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 ALKBH1Q13686 389 aaKnown RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 RPL22L1Q6P5R6 122 aaKnown RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR51E1Q8TCB6 317 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 MIB2Q96AX9 1013 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 TSPAN32Q96QS1 320 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR2S2Q9NQN1 319 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 C19orf25Q9UFG5 118 aaPredicted RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 KLHL21Q9UJP4 597 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 TRAV36DV7A0A075B6V5 113 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 A0A1W2PQ72 361 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 H3BMH7 237 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 TP53I11O14683 189 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 SLC19A2O60779 497 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 SDHAP31040 664 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 FASLGP48023 281 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 PITPNAQ00169 270 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 CFHR1Q03591 330 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 SLC36A2Q495M3 483 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR51A2Q8NGJ7 313 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 PELOQ9BRX2 385 aaKnown RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 SLC22A11Q9NSA0 550 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 ACAD8Q9UKU7 415 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 HTR3EA5X5Y0 456 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 TRIM64A6NGJ6 449 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 A8MVM7 634 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 I3L521 148 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 RER1O15258 196 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 CRTAPO75718 401 aaPredicted RBP11.38□□□□□ -0.59
BDNF-215ENST00000530861 SCGB1D2O95969 90 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 P04436 131 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 GUSBP08236 651 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 TMEM225BP0DP42 221 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 ARIH2OSQ8N7S6 290 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 NPEPL1Q8NDH3 523 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 OR14A16Q8NHC5 309 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 SIGLEC11Q96RL6 698 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 NRIP3Q9NQ35 241 aa11.38□□□□□ -0.59
BDNF-215ENST00000530861 PLA2G10O15496 165 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 LMX1BO60663 402 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 ABOP16442 354 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SERPINA2P20848 420 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 GABRR1P24046 479 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 AGFG1P52594 562 aaKnown RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.37□□□□□ -0.59
BDNF-215ENST00000530861 LCN10Q6JVE6 187 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 TMEM205Q6UW68 189 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 LRRC28Q86X40 367 aaPredicted RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 PRR18Q8N4B5 295 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 OR1N1Q8NGS0 311 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SLC22A8Q8TCC7 542 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SLC41A2Q96JW4 573 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 ABHD6Q9BV23 337 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 TMEM14AQ9Y6G1 99 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 V9GYH0 126 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 CACNA1AO00555 2505 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 TRAV8-7A0A075B6U6 113 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 A0A1W2PQM1 296 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 OR2T1O43869 369 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 ZNF354AO60765 605 aaPredicted RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 POLR2HP52434 150 aaKnown RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 POU4F2Q12837 409 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 RAB11BQ15907 218 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 PYHIN1Q6K0P9 492 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 NOXA1Q86UR1 476 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 RPS19BP1Q86WX3 136 aaKnown RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 ZNF440Q8IYI8 595 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 IL17RDQ8NFM7 739 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 ALKBH3Q96Q83 286 aaPredicted RBP11.37□□□□□ -0.59
BDNF-215ENST00000530861 ACKR4Q9NPB9 350 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 SRPK3Q9UPE1 567 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 B3GALT1Q9Y5Z6 326 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 IGF2RP11717 2491 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 CYB5AP00167 134 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 TCRBP04435 133 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 EPXP11678 715 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 KLK2P20151 261 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 HOXD12P35452 270 aa11.37□□□□□ -0.59
BDNF-215ENST00000530861 RFX2P48378 723 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms