RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TSPAN32Q96QS1 320 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 INAFM1C9JVW0 142 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 TLX2O43763 284 aaPredicted RBP28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 CD5LO43866 347 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 SEMG1P04279 462 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 TCN1P20061 433 aaPredicted RBP28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 IQCCQ4KMZ1 466 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 IGFN1Q86VF2 1251 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 NEU4Q8WWR8 484 aaPredicted RBP28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 PYURFQ96I23 114 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 CDRT15Q96T59 188 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 KCNN2Q9H2S1 579 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 ABCA2Q9BZC7 2435 aa28.47■■■□□ 2.15
SSSCA1-205ENST00000527920 SONP18583 2426 aaKnown RBP28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 IGKV1D-43A0A0B4J1Z2 117 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 CD14P08571 375 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 PCSK6P29122 969 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 LIMS1P48059 325 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 PLP2Q04941 152 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 KRT72Q14CN4 511 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 MSMPQ1L6U9 139 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 FGD3Q5JSP0 725 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 FOXL2NBQ6ZUU3 175 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 OR1J2Q8NGS2 313 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 MRPL37Q9BZE1 423 aaKnown RBP28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 DYNLRB1Q9NP97 96 aa28.46■■■□□ 2.15
SSSCA1-205ENST00000527920 IQCMA0A1B0GVH7 501 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 LOC390937A0A1W2PQ73 354 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 VWC2LB2RUY7 222 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 DYNC1I1O14576 645 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 SYNGR3O43761 229 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 AHCYL1O43865 530 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 CDAP32320 146 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 TBC1D28Q2M2D7 210 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 FAM27BQ5VT28 67 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 CCT8L2Q96SF2 557 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 FUZQ9BT04 418 aa28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 KRCC1Q9NPI7 259 aaPredicted RBP28.45■■■□□ 2.14
SSSCA1-205ENST00000527920 JMJD1CQ15652 2540 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 ARPC2O15144 300 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 ZNF26P17031 533 aaPredicted RBP28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 SMIM11AP58511 58 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 LRRC18Q8N456 261 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 NSMAFQ92636 917 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 FAM46AQ96IP4 442 aaKnown RBP28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 NSMCE2Q96MF7 247 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 PIMREGQ9BSJ6 248 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 LRMDAQ9H2I8 198 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 CDH20Q9HBT6 801 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 SIGLEC7Q9Y286 467 aa28.44■■■□□ 2.14
SSSCA1-205ENST00000527920 TRBV4-1A0A0J9YWV2 114 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 M0R233 179 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 IGFBP1P08833 259 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 USF1P22415 310 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 RPL4P36578 427 aaKnown RBP28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 OMPP47874 163 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 TMEM249Q2WGJ8 235 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 FAM122BQ7Z309 247 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 DEFB107AQ8IZN7 70 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 GPX7Q96SL4 187 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 CCNB1IP1Q9NPC3 277 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 GRHPRQ9UBQ7 328 aa28.43■■■□□ 2.14
SSSCA1-205ENST00000527920 PTP4A3O75365 173 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 NDUFB2O95178 105 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 ERVK-25P63136 954 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 HSF2Q03933 536 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 PAQR4Q8N4S7 273 aaPredicted RBP28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 CLDN22Q8N7P3 220 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 ZNF540Q8NDQ6 660 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 MS4A5Q9H3V2 200 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 ADAM18Q9Y3Q7 739 aa28.42■■■□□ 2.14
SSSCA1-205ENST00000527920 DIRAS1O95057 198 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 ADRA2AP08913 450 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 CST2P09228 141 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 GUCA1AP43080 201 aaPredicted RBP28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 NR4A2P43354 598 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 SEC23BQ15437 767 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 SGCAQ16586 387 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 PABPC1L2AQ5JQF8 200 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 GPR139Q6DWJ6 353 aa28.41■■■□□ 2.14
SSSCA1-205ENST00000527920 SH3PXD2BA1X283 911 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 XKRYO14609 159 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 FAM107AO95990 144 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 ZNF32P17041 273 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 APLNRP35414 380 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 MXRA7P84157 204 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 FITM2Q8N6M3 262 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 MCUR1Q96AQ8 359 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 RSRC1Q96IZ7 334 aaKnown RBP28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 ZNF570Q96NI8 536 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 WACQ9BTA9 647 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 BCL2L14Q9BZR8 327 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 NRIP3Q9NQ35 241 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 REV1Q9UBZ9 1251 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 RTTNQ86VV8 2226 aa28.4■■■□□ 2.14
SSSCA1-205ENST00000527920 DAOP14920 347 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 MSX2P35548 267 aaPredicted RBP28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 RAD52P43351 418 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 PCBD1P61457 104 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 MESTQ5EB52 335 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms